Literature DB >> 11086706

Effect of substitution pattern on 1H, 13C NMR chemical shifts and 1J(CH) coupling constants in heparin derivatives.

E A Yates1, F Santini, B De Cristofano, N Payre, C Cosentino, M Guerrini, A Naggi, G Torri, M Hricovini.   

Abstract

1H, 13C NMR chemical shifts and 1J(CH) coupling constants were measured for derivatives of heparin containing various sulfation patterns. 1H and 13C chemical shifts varied considerably after introducing electronegative sulfate groups. Chemical shifts of protons linked to carbons changed by up to 1 ppm on substitution with O- and N-sulfate or acetyl groups. Differences up to 10 ppm were detected for 13C chemical shifts in substituted glucosamine, but a less clear dependence was found in iduronate. 1J(CH) values formed two groups, corresponding to either sulfation or non-sulfation at positions 2 and 3 of glucosamine. O-sulfation caused increases up to 6 Hz in 1J(CH) and N-sulfation decreases up to 4 Hz. N-acetylation gave similar 1J(CH) values to N-sulfation. At positions 2 and 3 of iduronate the trend was less marked; 1J(CH) for O-sulfated positions usually increasing. Introduction of sulfate groups influences chemical shift and 1J(CH) values at the position of substitution, but also at more remote positions. 1J(CH) at the glycosidic linkage positions varied between free-amino and N-sulfated compounds, by up to 9 Hz. These results and changes in chemical shift values suggest that iduronate residues and the glycosidic linkages are affected, indicating overall conformational change. This may have important implications for biological activities.

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Year:  2000        PMID: 11086706     DOI: 10.1016/s0008-6215(00)00144-0

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  10 in total

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2.  Biologically Relevant Metal-Cation Binding Induces Conformational Changes in Heparin Oligosaccharides as Measured by Ion Mobility Mass Spectrometry.

Authors:  Youjin Seo; Matthew R Schenauer; Julie A Leary
Journal:  Int J Mass Spectrom       Date:  2011-06-01       Impact factor: 1.986

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Authors:  Maryse Delehedde; Malcolm Lyon; John T Gallagher; Philip S Rudland; David G Fernig
Journal:  Biochem J       Date:  2002-08-15       Impact factor: 3.857

4.  Cloning and characterization of new glycopeptide gene clusters found in an environmental DNA megalibrary.

Authors:  Jacob J Banik; Sean F Brady
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-05       Impact factor: 11.205

5.  Heparan sulfate phage display antibodies identify distinct epitopes with complex binding characteristics: insights into protein binding specificities.

Authors:  Sophie M Thompson; David G Fernig; Edwin C Jesudason; Paul D Losty; Els M A van de Westerlo; Toin H van Kuppevelt; Jeremy E Turnbull
Journal:  J Biol Chem       Date:  2009-12-18       Impact factor: 5.157

6.  Orthogonal analytical approaches to detect potential contaminants in heparin.

Authors:  Marco Guerrini; Zhenqing Zhang; Zachary Shriver; Annamaria Naggi; Sayaka Masuko; Robert Langer; Benito Casu; Robert J Linhardt; Giangiacomo Torri; Ram Sasisekharan
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-23       Impact factor: 11.205

7.  The interaction between oxytocin and heparin.

Authors:  Einat Schnur; Timothy R Rudd
Journal:  RSC Adv       Date:  2020-07-29       Impact factor: 3.361

8.  Heparan sulfate regulates amyloid precursor protein processing by BACE1, the Alzheimer's beta-secretase.

Authors:  Zoe Scholefield; Edwin A Yates; Gareth Wayne; Augustin Amour; William McDowell; Jeremy E Turnbull
Journal:  J Cell Biol       Date:  2003-10-06       Impact factor: 10.539

9.  Divergent Synthesis of Heparan Sulfate Oligosaccharides.

Authors:  Steven B Dulaney; Yongmei Xu; Peng Wang; Gopinath Tiruchinapally; Zhen Wang; Jolian Kathawa; Mohammad H El-Dakdouki; Bo Yang; Jian Liu; Xuefei Huang
Journal:  J Org Chem       Date:  2015-12-04       Impact factor: 4.354

10.  Aggregation Kinetics and Filament Structure of a Tau Fragment Are Influenced by the Sulfation Pattern of the Cofactor Heparin.

Authors:  David Townsend; Nigel J Fullwood; Edwin A Yates; David A Middleton
Journal:  Biochemistry       Date:  2020-10-01       Impact factor: 3.162

  10 in total

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