Literature DB >> 11085647

On the role of strain in blue copper proteins.

U Ryde1, M H Olsson, B O Roos, J O De Kerpel, K Pierloot.   

Abstract

Theoretical investigations of the structure and function of the blue copper proteins are described. We have studied the optimum vacuum geometry of oxidised and reduced copper sites, the relative stability of trigonal and tetragonal Cu(II) structures, the relation between the structure and electronic spectra, the reorganisation energy, and reduction potentials. Our calculations give no support to the suggestion that strain plays a significant role in the function of these proteins; on the contrary, our results show that the structures encountered in the proteins are close to their optimal vacuum geometries (within 7 kJ/mol). We stress the importance of defining what is meant by strain and of quantifying strain energies or forces in order to make strain hypotheses testable.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 11085647     DOI: 10.1007/s007750000147

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  12 in total

1.  Flexibility of the metal-binding region in apo-cupredoxins.

Authors:  María-Eugenia Zaballa; Luciano A Abriata; Antonio Donaire; Alejandro J Vila
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-29       Impact factor: 11.205

2.  A high-resolution XAS study of aqueous Cu(II) in liquid and frozen solutions: pyramidal, polymorphic, and non-centrosymmetric.

Authors:  Patrick Frank; Maurizio Benfatto; Munzarin Qayyam; Britt Hedman; Keith O Hodgson
Journal:  J Chem Phys       Date:  2015-02-28       Impact factor: 3.488

3.  Role of protein frame and solvent for the redox properties of azurin from Pseudomonas aeruginosa.

Authors:  Michele Cascella; Alessandra Magistrato; Ivano Tavernelli; Paolo Carloni; Ursula Rothlisberger
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-18       Impact factor: 11.205

4.  The X-ray absorption spectroscopic model of the copper(II) imidazole complex ion in liquid aqueous solution: a strongly solvated square pyramid.

Authors:  Patrick Frank; Maurizio Benfatto; Britt Hedman; Keith O Hodgson
Journal:  Inorg Chem       Date:  2012-02-08       Impact factor: 5.165

5.  Coordination chemistry: all square for high-spin iron(II).

Authors:  Patrick L Holland
Journal:  Nat Chem       Date:  2011-06-23       Impact factor: 24.427

6.  How are hydrogen bonds modified by metal binding?

Authors:  Charlotte Husberg; Ulf Ryde
Journal:  J Biol Inorg Chem       Date:  2013-03-31       Impact factor: 3.358

7.  Molecular dynamics simulations of apocupredoxins: insights into the formation and stabilization of copper sites under entatic control.

Authors:  Luciano A Abriata; Alejandro J Vila; Matteo Dal Peraro
Journal:  J Biol Inorg Chem       Date:  2014-01-30       Impact factor: 3.358

8.  Theoretical model of the aqua-copper [Cu(H2O)5]+ cation interactions with guanine.

Authors:  Jaroslav V Burda; Manoj K Shukla; Jerzy Leszczynski
Journal:  J Mol Model       Date:  2005-06-01       Impact factor: 1.810

9.  Determination of the geometric structure of the metal site in a blue copper protein by paramagnetic NMR.

Authors:  D Flemming Hansen; Jens J Led
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-30       Impact factor: 11.205

10.  [Cu(aq)]2+ is structurally plastic and the axially elongated octahedron goes missing.

Authors:  Patrick Frank; Maurizio Benfatto; Munzarin Qayyum
Journal:  J Chem Phys       Date:  2018-05-28       Impact factor: 3.488

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.