Literature DB >> 11069818

Genome screen for asthma and related phenotypes in the French EGEA study.

M H Dizier1, C Besse-Schmittler, M Guilloud-Bataille, I Annesi-Maesano, M Boussaha, J Bousquet, D Charpin, A Degioanni, F Gormand, A Grimfeld, J Hochez, G Hyne, A Lockhart, M Luillier-Lacombe, R Matran, F Meunier, F Neukirch, Y Pacheco, V Parent, E Paty, I Pin, C Pison, P Scheinmann, N Thobie, D Vervloet, F Kauffmann, J Feingold, M Lathrop, F Demenais.   

Abstract

A genome-wide search was conducted in 107 nuclear families with at least two siblings with asthma, as part of the French EGEA study. A two-stage analysis strategy was applied to the 107 families divided into two independent subsets of 46 and 61 families, where all regions detected in the first set of families were tested for replication in the second set. In addition, all regions reported by published genome scans in different populations were examined in the total sample. A total of 254 markers were typed in the first set of families and 70% of them in the second set. Linkage was investigated by model-free methods for asthma and four asthma-related phenotypes: bronchial responsiveness (BR), skin test response, total immunoglobulin E (IgE) levels, and eosinophil count. The two-stage analysis led to the detection of three regions: 11p13 for IgE, 12q24 for eosinophils, and 17q12-21 for asthma and skin tests. Among the regions reported by published genome screens, seven were found in the 107 French EGEA families: three being already detected by the two-stage analysis, 11p13 (p = 0.005), 12q24 (p = 0.0008), and 17q12-21 (p = 0.001), and four additional ones, 1p31 (p = 0.005) for asthma, 11q13 (p = 0.006) for IgE, 13q31 (p = 0.001) for eosinophils, and 19q13 (p = 0.02) for BR.

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Year:  2000        PMID: 11069818     DOI: 10.1164/ajrccm.162.5.2002113

Source DB:  PubMed          Journal:  Am J Respir Crit Care Med        ISSN: 1073-449X            Impact factor:   21.405


  55 in total

1.  A second-generation genomewide screen for asthma-susceptibility alleles in a founder population.

Authors:  C Ober; A Tsalenko; R Parry; N J Cox
Journal:  Am J Hum Genet       Date:  2000-10-05       Impact factor: 11.025

2.  Genomewide scans of complex human diseases: true linkage is hard to find.

Authors:  J Altmüller; L J Palmer; G Fischer; H Scherb; M Wjst
Journal:  Am J Hum Genet       Date:  2001-09-14       Impact factor: 11.025

3.  A major susceptibility gene for asthma maps to chromosome 14q24.

Authors:  Hakon Hakonarson; Unnur S Bjornsdottir; Eva Halapi; Snaebjorn Palsson; Elva Adalsteinsdottir; David Gislason; Gudmundur Finnbogason; Thorarinn Gislason; Kristleifur Kristjansson; Thor Arnason; Illugi Birkisson; Michael L Frigge; Augustine Kong; Jeffrey R Gulcher; Kari Stefansson
Journal:  Am J Hum Genet       Date:  2002-07-15       Impact factor: 11.025

4.  A genome-wide search for allergic response (atopy) genes in three ethnic groups: Collaborative Study on the Genetics of Asthma.

Authors:  Malcolm N Blumenthal; Carl D Langefeld; Terri H Beaty; Eugene R Bleecker; Carole Ober; Lucille Lester; Ethan Lange; Kathleen C Barnes; Raoul Wolf; Richard A King; Julian Solway; William Oetting; Deborah A Meyers; Stephen S Rich
Journal:  Hum Genet       Date:  2003-10-25       Impact factor: 4.132

Review 5.  Genomewide association studies in allergy and the influence of ethnicity.

Authors:  Kathleen C Barnes
Journal:  Curr Opin Allergy Clin Immunol       Date:  2010-10

6.  Robust estimation of experimentwise P values applied to a genome scan of multiple asthma traits identifies a new region of significant linkage on chromosome 20q13.

Authors:  Manuel A R Ferreira; Louise O'Gorman; Peter Le Souëf; Paul R Burton; Brett G Toelle; Colin F Robertson; Peter M Visscher; Nicholas G Martin; David L Duffy
Journal:  Am J Hum Genet       Date:  2005-10-14       Impact factor: 11.025

Review 7.  African Americans with asthma: genetic insights.

Authors:  Kathleen C Barnes; Audrey V Grant; Nadia N Hansel; Peisong Gao; Georgia M Dunston
Journal:  Proc Am Thorac Soc       Date:  2007-01

8.  Cysteinyl leukotriene receptor 1 is also a pyrimidinergic receptor and is expressed by human mast cells.

Authors:  E A Mellor; A Maekawa; K F Austen; J A Boyce
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

9.  Polymorphisms in chemokine and chemokine receptor genes and the development of coal workers' pneumoconiosis.

Authors:  Rachel Nadif; Margaret Mintz; Selma Rivas-Fuentes; Anne Jedlicka; Elise Lavergne; Mathieu Rodero; Francine Kauffmann; Christophe Combadière; Steven R Kleeberger
Journal:  Cytokine       Date:  2006-02-07       Impact factor: 3.861

10.  Linkage analysis with dense SNP maps in isolated populations.

Authors:  Céline Bellenguez; Carole Ober; Catherine Bourgain
Journal:  Hum Hered       Date:  2009-04-09       Impact factor: 0.444

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