Literature DB >> 11068880

4-nitroimidazole binding to horse metmyoglobin: evidence for preferential anion binding.

K C Taylor1, L B Vitello, J E Erman.   

Abstract

The ionization of 4-nitroimidazole to 4-nitroimidazolate was investigated as a function of ionic strength. The apparent pKa varies from 8.99 to 9.50 between 0.001 and 1.0 M ionic strength, respectively, at 25 degrees C. The ionic strength dependence of this ionization is anomalous. The binding of 4-nitroimidazole by horse metmyoglobin was studied between pH 5.0 and 11.5 and as a function of ionic strength between 0.01 and 1.0 M. The association rate constant is pH-dependent, varying from 24 M(-1)s(-1) at pH 5 to a maximum value of 280 M(-1)s(-1) at pH 9.5 and then decreasing to 10 M(-1)s(-1) at pH 11.5 in 0.1 M ionic strength buffers. The dissociation rate constant has a much smaller pH dependence, varying from 0.082 s(-1) at low pH to 0.035 s(-1) at high pH, with an apparent pKa of 6.5. The binding affinity of 4-nitroimidazole to horse metmyoglobin is about 2.5 orders of magnitude stronger than that for imidazole and this increased affinity is attributed to the much slower dissociation rate for 4-nitroimidazole compared to that of imidazole. Although the ionic strength dependence of the binding rate is small and secondary kinetic salt effects can account for the ionic strength dependence of the association rate constant, the pH dependence of the rate constants and microscopic reversibility arguments indicate that the anionic form of the ligand binds more rapidly to all forms of metmyoglobin than does the neutral form of the ligand. However, the spectrum of the complex is similar to model complexes involving neutral imidazole and not imidazolate. The latter observation suggests that the initial metmyoglobin/4-nitroimidazolate complex rapidly binds a proton and the neutral form of the bound ligand is stabilized, probably through hydrogen binding with the distal histidine.

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Year:  2000        PMID: 11068880     DOI: 10.1006/abbi.2000.2039

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  5 in total

1.  Binding of imidazole, 1-methylimidazole and 4-nitroimidazole to yeast cytochrome c peroxidase (CcP) and the distal histidine mutant, CcP(H52L).

Authors:  James E Erman; Diana Chinchilla; Jason Studer; Lidia B Vitello
Journal:  Biochim Biophys Acta       Date:  2015-04-20

2.  Apolar distal pocket mutants of yeast cytochrome c peroxidase: Binding of imidazole, 1-methylimidazole and 4-nitroimidazole to the triAla, triVal, and triLeu variants.

Authors:  Anil Bidwai; Caitlan Ayala; Lidia B Vitello; James E Erman
Journal:  Biochim Biophys Acta       Date:  2015-04-18

3.  pH dependence of cyanide and imidazole binding to the heme domains of Sinorhizobium meliloti and Bradyrhizobium japonicum FixL.

Authors:  Anil K Bidwai; Angela J Ahrendt; John S Sullivan; Lidia B Vitello; James E Erman
Journal:  J Inorg Biochem       Date:  2015-10-22       Impact factor: 4.155

4.  Kinetic and equilibrium studies of acrylonitrile binding to cytochrome c peroxidase and oxidation of acrylonitrile by cytochrome c peroxidase compound I.

Authors:  Diana Chinchilla; Heather Kilheeney; Lidia B Vitello; James E Erman
Journal:  Biochem Biophys Res Commun       Date:  2013-11-28       Impact factor: 3.575

5.  pH dependence of cyanide binding to the ferric heme domain of the direct oxygen sensor from Escherichia coli and the effect of alkaline denaturation.

Authors:  Anil K Bidwai; Esther Y Ok; James E Erman
Journal:  Biochemistry       Date:  2008-09-05       Impact factor: 3.162

  5 in total

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