Literature DB >> 11063596

pH dependence of formation of a partially unfolded state of a Lys 73 --> His variant of iso-1-cytochrome c: implications for the alkaline conformational transition of cytochrome c.

C J Nelson1, B E Bowler.   

Abstract

The alkaline conformational transition of a lysine 73 --> histidine variant of iso-1-cytochrome c has been studied. The transition has been monitored at 695 nm, a band sensitive to the presence of the heme-methionine 80 bond, at the heme Soret band which is sensitive to the nature of the heme ligand, and by NMR methods. The guanidine hydrochloride dependence of the alkaline conformational transition has also been monitored. The histidine 73 protein has an unusual biphasic alkaline conformational transition at both 695 nm and the heme Soret band, consistent with a three-state process. The conformational transition is fully reversible. An equilibrium model has been developed to account for this behavior. With this model, it has been possible to obtain the acid constant for the trigger group, pK(H), of the low-pH phase from the equilibrium data. A pK(H) value of 6.6 +/- 0.1 in H(2)O was obtained, consistent with a histidine acting as the trigger group. The NMR data for the low-pH phase of the alkaline conformational transition are consistent with an imidazole ligand replacing Met 80. For the high-pH phase of the biphasic alkaline transition, the NMR data are consistent with lysine 79 being the heme ligand. Guanidine hydrochloride m values of 1.67 +/- 0.08 and 1.1 +/- 0.2 kcal mol(-1) M(-1) were obtained for the low- and high-pH phases of the biphasic alkaline transition of the histidine 73 protein, respectively, consistent with a greater structural disruption for the low-pH phase of the transition.

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Year:  2000        PMID: 11063596     DOI: 10.1021/bi0017778

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

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2.  Conformational stability and dynamics of cytochrome c affect its alkaline isomerization.

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3.  Thermodynamics of the alkaline transition in phytocyanins.

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Journal:  J Biol Inorg Chem       Date:  2007-06-15       Impact factor: 3.358

4.  Compressing the free energy range of substructure stabilities in iso-1-cytochrome c.

Authors:  Michael G Duncan; Michael D Williams; Bruce E Bowler
Journal:  Protein Sci       Date:  2009-06       Impact factor: 6.725

5.  Histidine-Lysine Axial Ligand Switching in a Hemoglobin: A Role for Heme Propionates.

Authors:  Dillon B Nye; Matthew R Preimesberger; Ananya Majumdar; Juliette T J Lecomte
Journal:  Biochemistry       Date:  2018-01-10       Impact factor: 3.162

6.  The response of Ω-loop D dynamics to truncation of trimethyllysine 72 of yeast iso-1-cytochrome c depends on the nature of loop deformation.

Authors:  Levi J McClelland; Sean M Seagraves; Md Khurshid Alam Khan; Melisa M Cherney; Swati Bandi; Justin E Culbertson; Bruce E Bowler
Journal:  J Biol Inorg Chem       Date:  2015-05-07       Impact factor: 3.358

7.  Effect of a K72A Mutation on the Structure, Stability, Dynamics, and Peroxidase Activity of Human Cytochrome c.

Authors:  Shiloh M Nold; Haotian Lei; Tung-Chung Mou; Bruce E Bowler
Journal:  Biochemistry       Date:  2017-06-21       Impact factor: 3.162

8.  Characterization of N-terminal amino group-heme ligation emerging upon guanidine hydrochloric acid induced unfolding of Hydrogenobacter thermophilus ferricytochrome c552.

Authors:  Hulin Tai; Shin Kawano; Yasuhiko Yamamoto
Journal:  J Biol Inorg Chem       Date:  2007-09-22       Impact factor: 3.358

9.  Disruption of a hydrogen bond network in human versus spider monkey cytochrome c affects heme crevice stability.

Authors:  Matthew E Goldes; Margaret E Jeakins-Cooley; Levi J McClelland; Tung-Chung Mou; Bruce E Bowler
Journal:  J Inorg Biochem       Date:  2015-12-31       Impact factor: 4.155

10.  Dynamics of the His79-heme alkaline transition of yeast iso-1-cytochrome c probed by conformationally gated electron transfer with Co(II)bis(terpyridine).

Authors:  Melisa M Cherney; Carolyn C Junior; Bryan B Bergquist; Bruce E Bowler
Journal:  J Am Chem Soc       Date:  2013-08-15       Impact factor: 15.419

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