Literature DB >> 11052945

Genomic analysis of gene expression in C. elegans.

A A Hill1, C P Hunter, B T Tsung, G Tucker-Kellogg, E L Brown.   

Abstract

Until now, genome-wide transcriptional profiling has been limited to single-cell organisms. The nematode Caenorhabditis elegans is a well-characterized metazoan in which the expression of all genes can be monitored by oligonucleotide arrays. We used such arrays to quantitate the expression of C. elegans genes throughout the development of this organism. The results provide an estimate of the number of expressed genes in the nematode, reveal relations between gene function and gene expression that can guide analysis of uncharacterized worm genes, and demonstrate a shift in expression from evolutionarily conserved genes to worm-specific genes over the course of development.

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Year:  2000        PMID: 11052945     DOI: 10.1126/science.290.5492.809

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  97 in total

1.  Quantitative analysis of mRNA amplification by in vitro transcription.

Authors:  L R Baugh; A A Hill; E L Brown; C P Hunter
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

2.  Arrays of arrays for high-throughput gene expression profiling.

Authors:  P P Zarrinkar; J K Mainquist; M Zamora; D Stern; J B Welsh; L M Sapinoso; G M Hampton; D J Lockhart
Journal:  Genome Res       Date:  2001-07       Impact factor: 9.043

3.  An assessment of Motorola CodeLink microarray performance for gene expression profiling applications.

Authors:  Ramesh Ramakrishnan; David Dorris; Anna Lublinsky; Allen Nguyen; Marc Domanus; Anna Prokhorova; Linn Gieser; Edward Touma; Randall Lockner; Murthy Tata; Xiaomei Zhu; Marcus Patterson; Richard Shippy; Timothy J Sendera; Abhijit Mazumder
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

4.  A question of size: the eukaryotic proteome and the problems in defining it.

Authors:  Paul M Harrison; Anuj Kumar; Ning Lang; Michael Snyder; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2002-03-01       Impact factor: 16.971

5.  A highly reproducible, linear, and automated sample preparation method for DNA microarrays.

Authors:  David R Dorris; Ramesh Ramakrishnan; Dionisios Trakas; Frank Dudzik; Richard Belval; Connie Zhao; Allen Nguyen; Marc Domanus; Abhijit Mazumder
Journal:  Genome Res       Date:  2002-06       Impact factor: 9.043

6.  Summaries of Affymetrix GeneChip probe level data.

Authors:  Rafael A Irizarry; Benjamin M Bolstad; Francois Collin; Leslie M Cope; Bridget Hobbs; Terence P Speed
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

7.  Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons.

Authors:  Alvaro Mateos; Joaquín Dopazo; Ronald Jansen; Yuhai Tu; Mark Gerstein; Gustavo Stolovitzky
Journal:  Genome Res       Date:  2002-11       Impact factor: 9.043

8.  Transcription profiling of the early gravitropic response in Arabidopsis using high-density oligonucleotide probe microarrays.

Authors:  Nick Moseyko; Tong Zhu; Hur-Song Chang; Xun Wang; Lewis J Feldman
Journal:  Plant Physiol       Date:  2002-10       Impact factor: 8.340

9.  Glutamine/proline-rich PQE-1 proteins protect Caenorhabditis elegans neurons from huntingtin polyglutamine neurotoxicity.

Authors:  Peter W Faber; Cindy Voisine; Daphne C King; Emily A Bates; Anne C Hart
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-16       Impact factor: 11.205

10.  Expression profiling with oligonucleotide arrays: technologies and applications for neurobiology.

Authors:  Timothy J Sendera; David Dorris; Ramesh Ramakrishnan; Allen Nguyen; Dionisios Trakas; Abhijit Mazumder
Journal:  Neurochem Res       Date:  2002-10       Impact factor: 3.996

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