Literature DB >> 1104357

Two ribose-5-phosphate isomerases from Escherichia coli K12: partial characterisation of the enzymes and consideration of their possible physiological roles.

M K Essenberg, R A Cooper.   

Abstract

Two physically and genetically distinct forms of ribosephosphate isomerase have been identified in Escherichia coli K12. The constitutive ribosephosphate isomerase A has a Km for ribose 5-phosphate (4.4 +/- 0.5 mM) six times greater than that of the inducible ribosephosphate isomerase B (0.83 +/- 0.13 mM). Treatment of the enzymes with 1.25 mM iodoacetate resulted in 100% loss of activity for ribosephosphate isomerase B, whereas ribosephosphate isomerase A was unaffected. Various cellular metabolites were tested and found to be without significant effect on either enzyme. The two enzymes could be separated by filtration on Sephadex G75 superfine and their apparent molecular weights were 45000 for ribosephosphate isomerase A and 32000-34000 for ribosephosphate isomerase B. Under certain conditions the two enzymes showed different patterns of heat inactivation but the results with ribosephosphate isomerase A varied in an unusual way with the protein concentration. Ribosephosphate isomerase B was formed inducibly in a mutant lacking ribosephosphate isomerase A but there was no evidence for the production of ribosephosphate isomerase B in wild-type cells. The formation of ribosephosphate isomerase B was not a consequence of the ribosephosphate isomerase B mutation, since strains could be constructed which formed both enzymes constitutively in the anticipated amounts. The ribosephosphate isomerase formed by a secondary mutant obtained from a ribosephosphate-isomerase-A-negative strain was identified as ribosephosphate isomerase B on the basis of its Km, elution profile from Sephadex G75, inhibition of iodoacetate, and heat inactivation. The ribosephosphate isomerases of another Escherichia coli K12 strain, X289, were investigated, since their properties were reported to be different from many of these described here for ribosephosphate isomerases A and B. In our hands strain X289 contained two ribosephosphate isomerases apparently identical to ribosephosphate isomerases A and B. The evidence to date suggests that ribosephosphate isomerase A catalyses the formation of ribose 5-phosphate from ribulose 5-phosphate and also participates in the reverse reaction during ribose and adenosine catabolism. The normal physiological role of the inducible ribosephosphate isomerase B is still uncertain.

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Year:  1975        PMID: 1104357     DOI: 10.1111/j.1432-1033.1975.tb02166.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  17 in total

1.  D-Allose catabolism of Escherichia coli: involvement of alsI and regulation of als regulon expression by allose and ribose.

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Journal:  J Bacteriol       Date:  1999-11       Impact factor: 3.490

2.  Structure of Escherichia coli ribose-5-phosphate isomerase: a ubiquitous enzyme of the pentose phosphate pathway and the Calvin cycle.

Authors:  Rong guang Zhang; C Evalena Andersson; Alexei Savchenko; Tatiana Skarina; Elena Evdokimova; Steven Beasley; Cheryl H Arrowsmith; Aled M Edwards; Andrzej Joachimiak; Sherry L Mowbray
Journal:  Structure       Date:  2003-01       Impact factor: 5.006

3.  The structure of an archaeal ribose-5-phosphate isomerase from Methanocaldococcus jannaschii (MJ1603).

Authors:  Richard W Strange; Svetlana V Antonyuk; Mark J Ellis; Yoshitaka Bessho; Seiki Kuramitsu; Shigeyuki Yokoyama; S Samar Hasnain
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-11-27

Review 4.  Carbohydrate metabolism in Archaea: current insights into unusual enzymes and pathways and their regulation.

Authors:  Christopher Bräsen; Dominik Esser; Bernadette Rauch; Bettina Siebers
Journal:  Microbiol Mol Biol Rev       Date:  2014-03       Impact factor: 11.056

5.  Escherichia coli rpiA gene encoding ribose phosphate isomerase A.

Authors:  B Hove-Jensen; M Maigaard
Journal:  J Bacteriol       Date:  1993-09       Impact factor: 3.490

6.  Ribose 5-phosphate isomerase type B from Trypanosoma cruzi: kinetic properties and site-directed mutagenesis reveal information about the reaction mechanism.

Authors:  Ana L Stern; Emmanuel Burgos; Laurent Salmon; Juan J Cazzulo
Journal:  Biochem J       Date:  2007-01-01       Impact factor: 3.857

7.  An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models.

Authors:  Dipak Barua; Joonhoon Kim; Jennifer L Reed
Journal:  PLoS Comput Biol       Date:  2010-10-28       Impact factor: 4.475

8.  Concerted proton transfer mechanism of Clostridium thermocellum ribose-5-phosphate isomerase.

Authors:  Jun Wang; Weitao Yang
Journal:  J Phys Chem B       Date:  2013-08-02       Impact factor: 2.991

9.  Ribose catabolism of Escherichia coli: characterization of the rpiB gene encoding ribose phosphate isomerase B and of the rpiR gene, which is involved in regulation of rpiB expression.

Authors:  K I Sørensen; B Hove-Jensen
Journal:  J Bacteriol       Date:  1996-02       Impact factor: 3.490

Review 10.  Genetics of pentose-phosphate pathway enzymes of Escherichia coli K-12.

Authors:  G A Sprenger
Journal:  Arch Microbiol       Date:  1995-11       Impact factor: 2.552

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