Literature DB >> 11026658

Microsatellites: consensus and controversy.

G K Chambers1, E S MacAvoy.   

Abstract

Microsatellite DNA loci have recently been adopted for many biological applications. Comparative studies across a wide range of species has revealed many details of their mutational properties and evolutionary life cycles. Experience shows that a full understanding of these processes is essential to ensure the effective use of microsatellites as analytical tools. In this article, we review the controversies that have arisen as biologists have taken up this new technology and the emerging consensus that has resulted from their debates. We point to the need for comparative DNA sequencing studies to produce input data for a new generation of theoretical models of microsatellite behaviour. We conclude by presenting our own conceptual model, 'Snakes and Ladders', as an aid to theory development.

Mesh:

Substances:

Year:  2000        PMID: 11026658     DOI: 10.1016/s0305-0491(00)00233-9

Source DB:  PubMed          Journal:  Comp Biochem Physiol B Biochem Mol Biol        ISSN: 1096-4959            Impact factor:   2.231


  55 in total

1.  Microsatellite-centromere mapping in the loach, Misgurnus anguillicaudatus.

Authors:  K Morishima; I Nakayama; K Arai
Journal:  Genetica       Date:  2001       Impact factor: 1.082

2.  Variable numbers of tandem repeats in Plasmodium falciparum genes.

Authors:  John C Tan; Asako Tan; Lisa Checkley; Caroline M Honsa; Michael T Ferdig
Journal:  J Mol Evol       Date:  2010-08-22       Impact factor: 2.395

3.  Evolution of Nine Microsatellite Loci in the Fungus Fusarium oxysporum.

Authors:  Jill E Demers; María del Mar Jiménez-Gasco
Journal:  J Mol Evol       Date:  2015-12-10       Impact factor: 2.395

4.  Genetic structure of a population of the fungus Leptosphaeria maculans in a disease nursery of Brassica napus in Australia.

Authors:  Helen L Hayden; Barbara J Howlett
Journal:  Curr Genet       Date:  2005-09-14       Impact factor: 3.886

Review 5.  Mutational dynamics of microsatellites.

Authors:  Atul Bhargava; F F Fuentes
Journal:  Mol Biotechnol       Date:  2010-03       Impact factor: 2.695

6.  Genetic diversity and structure of natural fragmented Chamaecyparis obtusa populations as revealed by microsatellite markers.

Authors:  Asako Matsumoto; Kohji Uchida; Yuriko Taguchi; Naoki Tani; Yoshihiko Tsumura
Journal:  J Plant Res       Date:  2010-01-21       Impact factor: 2.629

7.  Characterization of AT-rich microsatellites in common bean (Phaseolus vulgaris L.).

Authors:  Mathew W Blair; Hector F Buendía; Martha C Giraldo; Isabelle Métais; Didier Peltier
Journal:  Theor Appl Genet       Date:  2008-09-11       Impact factor: 5.699

Review 8.  Rapid and cost-effective screening of newly identified microsatellite loci by high-resolution melting analysis.

Authors:  Wolfgang Arthofer; Florian M Steiner; Birgit C Schlick-Steiner
Journal:  Mol Genet Genomics       Date:  2011-08-17       Impact factor: 3.291

9.  Microsatellite analysis reveals a progressive widening of the genetic basis in the elite durum wheat germplasm.

Authors:  M Maccaferri; M C Sanguineti; P Donini; R Tuberosa
Journal:  Theor Appl Genet       Date:  2003-07-04       Impact factor: 5.699

10.  Survey of microsatellite clustering in eight fully sequenced species sheds light on the origin of compound microsatellites.

Authors:  Robert Kofler; Christian Schlötterer; Evita Luschützky; Tamas Lelley
Journal:  BMC Genomics       Date:  2008-12-17       Impact factor: 3.969

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.