Literature DB >> 11024365

Bacterial promoters triggering biodegradation of aromatic pollutants.

E Díaz1, M A Prieto.   

Abstract

Unraveling the complex transcriptional regulation of bacterial catabolism of aromatic pollutants is a prerequisite for engineering efficient biological systems for many biotechnological applications. A first level of regulation relies on specific regulator-promoter pairs. There have been new insights into the molecular mechanisms that regulatory proteins use to sense a given signal and to activate transcription initiation from the cognate promoters. A second level of regulation allows adjustment of the expression of the particular catabolic operons in response to the global environmental conditions of the cells, and recent findings provide some clues about the mechanisms underlying such complex regulatory checkpoints.

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Year:  2000        PMID: 11024365     DOI: 10.1016/s0958-1669(00)00126-9

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  46 in total

Review 1.  The black cat/white cat principle of signal integration in bacterial promoters.

Authors:  I Cases; V de Lorenzo
Journal:  EMBO J       Date:  2001-01-15       Impact factor: 11.598

2.  Molecular determinants of the hpa regulatory system of Escherichia coli: the HpaR repressor.

Authors:  Beatriz Galán; Annie Kolb; Jesús M Sanz; José Luis García; María A Prieto
Journal:  Nucleic Acids Res       Date:  2003-11-15       Impact factor: 16.971

Review 3.  Bacterial transcriptional regulators for degradation pathways of aromatic compounds.

Authors:  David Tropel; Jan Roelof van der Meer
Journal:  Microbiol Mol Biol Rev       Date:  2004-09       Impact factor: 11.056

4.  Substrate-dependent regulation of anaerobic degradation pathways for toluene and ethylbenzene in a denitrifying bacterium, strain EbN1.

Authors:  Simon Kühner; Lars Wöhlbrand; Ingo Fritz; Wasco Wruck; Claus Hultschig; Peter Hufnagel; Michael Kube; Richard Reinhardt; Ralf Rabus
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490

5.  Multiple-level regulation of genes for protocatechuate degradation in Acinetobacter baylyi includes cross-regulation.

Authors:  Simone Yasmin Siehler; Süreyya Dal; Rita Fischer; Patricia Patz; Ulrike Gerischer
Journal:  Appl Environ Microbiol       Date:  2006-11-03       Impact factor: 4.792

6.  Integrated response to inducers by communication between a catabolic pathway and its regulatory system.

Authors:  Olga Martínez-Pérez; Aroa López-Sánchez; Francisca Reyes-Ramírez; Belén Floriano; Eduardo Santero
Journal:  J Bacteriol       Date:  2007-03-09       Impact factor: 3.490

7.  Oligomerization of BenM, a LysR-type transcriptional regulator: structural basis for the aggregation of proteins in this family.

Authors:  Obidimma C Ezezika; Sandra Haddad; Ellen L Neidle; Cory Momany
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-04-28

Review 8.  Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

Authors:  Manuel Carmona; María Teresa Zamarro; Blas Blázquez; Gonzalo Durante-Rodríguez; Javier F Juárez; J Andrés Valderrama; María J L Barragán; José Luis García; Eduardo Díaz
Journal:  Microbiol Mol Biol Rev       Date:  2009-03       Impact factor: 11.056

9.  The Azoarcus anaerobius 1,3-Dihydroxybenzene (Resorcinol) Anaerobic Degradation Pathway Is Controlled by the Coordinated Activity of Two Enhancer-Binding Proteins.

Authors:  Daniel Pacheco-Sánchez; Águeda Molina-Fuentes; Patricia Marín; Javier-I Medina-Bellver; Óscar González-López; Silvia Marqués
Journal:  Appl Environ Microbiol       Date:  2017-04-17       Impact factor: 4.792

10.  Bionemo: molecular information on biodegradation metabolism.

Authors:  Guillermo Carbajosa; Almudena Trigo; Alfonso Valencia; Ildefonso Cases
Journal:  Nucleic Acids Res       Date:  2008-11-05       Impact factor: 16.971

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