Literature DB >> 11017187

Induced fit in RNA-protein recognition.

J R Williamson1.   

Abstract

Two generalizations can be drawn from the recent rapid progress in understanding RNA-protein interactions. First, there is a great diversity of observed protein and RNA structural motifs. Second, formation of almost every RNA-protein complex that has been characterized involves conformational changes in the protein, the RNA, or both. The role of these conformational changes in the biological function of RNA-protein complexes is not at all clear. Whether or not conformational changes are a critical feature of ribonucleoprotein complex assembly or are an unimportant mechanistic detail, the ubiquity of these changes warrants careful consideration of their implications.

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Year:  2000        PMID: 11017187     DOI: 10.1038/79575

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  170 in total

1.  Transterm: a database of mRNAs and translational control elements.

Authors:  Grant H Jacobs; Oliver Rackham; Peter A Stockwell; Warren Tate; Chris M Brown
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  Assembly of the ribonucleoprotein complex containing the mRNA of the beta-subunit of the mitochondrial H+-ATP synthase requires the participation of two distal cis-acting elements and a complex set of cellular trans-acting proteins.

Authors:  Javier Ricart; José M Izquierdo; Carlo M Di Liegro; José M Cuezva
Journal:  Biochem J       Date:  2002-07-15       Impact factor: 3.857

Review 3.  Nucleic acid recognition by OB-fold proteins.

Authors:  Douglas L Theobald; Rachel M Mitton-Fry; Deborah S Wuttke
Journal:  Annu Rev Biophys Biomol Struct       Date:  2003-02-18

4.  Common and distinctive features of GNRA tetraloops based on a GUAA tetraloop structure at 1.4 A resolution.

Authors:  Carl C Correll; Kerren Swinger
Journal:  RNA       Date:  2003-03       Impact factor: 4.942

5.  Hierarchical, clustered protein interactions with U4/U6 snRNA: a biochemical role for U4/U6 proteins.

Authors:  Stephanie Nottrott; Henning Urlaub; Reinhard Lührmann
Journal:  EMBO J       Date:  2002-10-15       Impact factor: 11.598

Review 6.  RNA Structural Differentiation: Opportunities with Pattern Recognition.

Authors:  Christopher S Eubanks; Amanda E Hargrove
Journal:  Biochemistry       Date:  2018-12-18       Impact factor: 3.162

7.  The common and the distinctive features of the bulged-G motif based on a 1.04 A resolution RNA structure.

Authors:  Carl C Correll; Jutta Beneken; Matthew J Plantinga; Melissa Lubbers; Yuen-Ling Chan
Journal:  Nucleic Acids Res       Date:  2003-12-01       Impact factor: 16.971

8.  Insights into the dynamics of specific telomeric single-stranded DNA recognition by Pot1pN.

Authors:  Johnny E Croy; Deborah S Wuttke
Journal:  J Mol Biol       Date:  2009-02-13       Impact factor: 5.469

9.  Characterizing the relative orientation and dynamics of RNA A-form helices using NMR residual dipolar couplings.

Authors:  Maximillian H Bailor; Catherine Musselman; Alexandar L Hansen; Kush Gulati; Dinshaw J Patel; Hashim M Al-Hashimi
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

10.  Molecular biology: Protein binding cannot subdue a lively RNA.

Authors:  Kathleen B Hall
Journal:  Nature       Date:  2014-02-12       Impact factor: 49.962

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