Literature DB >> 11017064

Prediction of protein interactions: metabolic enzymes are frequently involved in gene fusion.

S Tsoka1, C A Ouzounis.   

Abstract

Mesh：

Year:  2000        PMID： 11017064     DOI： 10.1038/79847

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


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  22 in total

1.  Genes linked by fusion events are generally of the same functional category: a systematic analysis of 30 microbial genomes.

Authors:  I Yanai; A Derti; C DeLisi
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

2.  Functional versatility and molecular diversity of the metabolic map of Escherichia coli.

Authors:  S Tsoka; C A Ouzounis
Journal:  Genome Res       Date:  2001-09       Impact factor: 9.043

3.  The phylogenetic extent of metabolic enzymes and pathways.

Authors:  José Manuel Peregrin-Alvarez; Sophia Tsoka; Christos A Ouzounis
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

4.  Computational approaches to protein-protein interaction.

Authors:  Giacomo Franzot; Oliviero Carugo
Journal:  J Struct Funct Genomics       Date:  2003

Review 5.  Proteome-wide prediction of protein-protein interactions from high-throughput data.

Authors:  Zhi-Ping Liu; Luonan Chen
Journal:  Protein Cell       Date:  2012-06-22       Impact factor: 14.870

6.  Computational Methods for Predicting Protein-Protein Interactions Using Various Protein Features.

Authors:  Ziyun Ding; Daisuke Kihara
Journal:  Curr Protoc Protein Sci       Date:  2018-06-21

7.  Gene transfer and genome plasticity in Thermotoga maritima, a model hyperthermophilic species.

Authors:  Emmanuel F Mongodin; Ioana R Hance; Robert T Deboy; Steven R Gill; Sean Daugherty; Robert Huber; Claire M Fraser; Karl Stetter; Karen E Nelson
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

8.  Bayesian inference for genomic data integration reduces misclassification rate in predicting protein-protein interactions.

Authors:  Chuanhua Xing; David B Dunson
Journal:  PLoS Comput Biol       Date:  2011-07-28       Impact factor: 4.475

9.  Multiple horizontal gene transfer events and domain fusions have created novel regulatory and metabolic networks in the oomycete genome.

Authors:  Paul Francis Morris; Laura Rose Schlosser; Katherine Diane Onasch; Tom Wittenschlaeger; Ryan Austin; Nicholas Provart
Journal:  PLoS One       Date:  2009-07-02       Impact factor: 3.240

10.  Denoising inferred functional association networks obtained by gene fusion analysis.

Authors:  Atanas Kamburov; Leon Goldovsky; Shiri Freilich; Aliki Kapazoglou; Victor Kunin; Anton J Enright; Athanasios Tsaftaris; Christos A Ouzounis
Journal:  BMC Genomics       Date:  2007-12-14       Impact factor: 3.969
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