Literature DB >> 11011081

A comparative analysis of freon substitutes in the purification of reovirus and calicivirus.

I I Mendez1, L L Hermann, P R Hazelton, K M Coombs.   

Abstract

Freon 113 (Freon) is an essential component used in some viral purification methods to separate virus from infected cell debris. With its environmental and toxic hazards, Freon's availability is limited and more tightly regulated. Several organic solvent substitutes were selected to identify a suitable Freon replacement for the purification of both cultivable reovirus and fastidious calicivirus. Reovirus was extracted from tissue cultured cells with each solvent tested and purified in cesium chloride gradients by standard techniques. Purified virions were analyzed for conservation of physical and biological properties by morphological examination and infectivity studies. The purification of calicivirus nucleic acid from stool samples using selected solvents was also examined. Solvent-extracted calicivirus RNA was reverse transcribed and quantified by polymerase chain reaction amplification of a standard diagnostic 117 bp amplicon. These studies indicated that Vertrel XF (a newly developed environmentally friendly Freon substitute) and a 7:3 mixture of isopentane/1-chlorobutane are suitable replacements. Considerations of flammability and ease of use suggest that Vertrel XF is the preferred choice as a Freon substitute for the purification of these non-enveloped viruses.

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Year:  2000        PMID: 11011081     DOI: 10.1016/s0166-0934(00)00217-2

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  58 in total

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Authors:  A P Queiroz; F M Santos; A Sassaroli; C M Hársi; T A Monezi; D U Mehnert
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

2.  Snow Mountain virus genome sequence and virus-like particle assembly.

Authors:  Vance P Lochridge; Michele E Hardy
Journal:  Virus Genes       Date:  2003-01       Impact factor: 2.332

3.  Cell entry-associated conformational changes in reovirus particles are controlled by host protease activity.

Authors:  Jillann A Madren; Payel Sarkar; Pranav Danthi
Journal:  J Virol       Date:  2012-01-25       Impact factor: 5.103

4.  Evaluation of the sensitivity and specificity of primer pairs and the efficiency of RNA extraction procedures to improve noroviral detection from oysters by nested reverse transcription-polymerase chain reaction.

Authors:  Cheonghoon Lee; Sooryun Cheong; Hee-Jung Lee; Miye Kwon; Ilnam Kang; Eun-Gyoung Oh; Hong-Sik Yu; Soon-Bum Shin; Sang-Jong Kim
Journal:  J Microbiol       Date:  2010-11-03       Impact factor: 3.422

5.  Determinants of strain-specific differences in efficiency of reovirus entry.

Authors:  Payel Sarkar; Pranav Danthi
Journal:  J Virol       Date:  2010-10-13       Impact factor: 5.103

6.  Detection of norovirus capsid protein in authentic standards and in stool extracts by matrix-assisted laser desorption ionization and nanospray mass spectrometry.

Authors:  David R Colquhoun; Kellogg J Schwab; Robert N Cole; Rolf U Halden
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

7.  Reovirus variants with mutations in genome segments S1 and L2 exhibit enhanced virion infectivity and superior oncolysis.

Authors:  Maya Shmulevitz; Shashi A Gujar; Dae-Gyun Ahn; Adil Mohamed; Patrick W K Lee
Journal:  J Virol       Date:  2012-04-24       Impact factor: 5.103

8.  Conformational changes accompany activation of reovirus RNA-dependent RNA transcription.

Authors:  Israel I Mendez; Scott G Weiner; Yi-Min She; Mark Yeager; Kevin M Coombs
Journal:  J Struct Biol       Date:  2008-01-26       Impact factor: 2.867

9.  Geometric mismatches within the concentric layers of rotavirus particles: a potential regulatory switch of viral particle transcription activity.

Authors:  Sonia Libersou; Xavier Siebert; Malika Ouldali; Leandro F Estrozi; Jorge Navaza; Annie Charpilienne; Pascale Garnier; Didier Poncet; Jean Lepault
Journal:  J Virol       Date:  2008-01-09       Impact factor: 5.103

10.  Molecular analysis of the VP7, VP4, VP6, NSP4, and NSP5/6 genes of a buffalo rotavirus strain: identification of the rare P[3] rhesus rotavirus-like VP4 gene allele.

Authors:  V Martella; M Ciarlet; A Pratelli; S Arista; V Terio; G Elia; A Cavalli; M Gentile; N Decaro; G Greco; M A Cafiero; M Tempesta; C Buonavoglia
Journal:  J Clin Microbiol       Date:  2003-12       Impact factor: 5.948

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