Literature DB >> 11007791

The crystal structure of 3alpha -hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni shows a novel oligomerization pattern within the short chain dehydrogenase/reductase family.

C Grimm1, E Maser, E Möbus, G Klebe, K Reuter, R Ficner.   

Abstract

The crystal structure of 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase from Comamonas testosteroni (3alpha-HSDH) as well as the structure of its binary complex with NAD(+) have been solved at 1.68-A and 1.95-A resolution, respectively. The enzyme is a member of the short chain dehydrogenase/reductase (SDR) family. Accordingly, the active center and the conformation of the bound nucleotide cofactor closely resemble those of other SDRs. The crystal structure reveals one homodimer per asymmetric unit representing the physiologically active unity. Dimerization takes place via an interface essentially built-up by helix alphaG and strand betaG of each subunit. So far this type of intermolecular contact has exclusively been observed in homotetrameric SDRs but never in the structure of a homodimeric SDR. The formation of a tetramer is blocked in 3alpha-HSDH by the presence of a predominantly alpha-helical subdomain which is missing in all other SDRs of known structure.

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Year:  2000        PMID: 11007791     DOI: 10.1074/jbc.M007559200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  19 in total

1.  Crystallization and preliminary X-ray analysis of the complex of NADH and 3alpha-hydroxysteroid dehydrogenase from Pseudomonas sp. B-0831.

Authors:  Sachiyo Kataoka; Shota Nakamura; Tadayasu Ohkubo; Shigeru Ueda; Susumu Uchiyama; Yuji Kobayashi; Masayuki Oda
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-05-31

2.  Crystal structure of a carbonyl reductase from Candida parapsilosis with anti-Prelog stereospecificity.

Authors:  Rongzhen Zhang; Guangyu Zhu; Wenchi Zhang; Sheng Cao; Xianjin Ou; Xuemei Li; Mark Bartlam; Yan Xu; Xuejun C Zhang; Zihe Rao
Journal:  Protein Sci       Date:  2008-06-19       Impact factor: 6.725

3.  Steroid Degradation in Comamonas testosteroni TA441: Identification of Metabolites and the Genes Involved in the Reactions Necessary before D-Ring Cleavage.

Authors:  Masae Horinouchi; Hiroyuki Koshino; Michal Malon; Hiroshi Hirota; Toshiaki Hayashi
Journal:  Appl Environ Microbiol       Date:  2018-10-30       Impact factor: 4.792

4.  Molecular dynamics simulation studies of the wild-type, I21V, and I16T mutants of isoniazid-resistant Mycobacterium tuberculosis enoyl reductase (InhA) in complex with NADH: toward the understanding of NADH-InhA different affinities.

Authors:  Evelyn Koeche Schroeder; Luiz Augusto Basso; Diógenes Santiago Santos; Osmar Norberto de Souza
Journal:  Biophys J       Date:  2005-05-20       Impact factor: 4.033

5.  Structural functionality, catalytic mechanism modeling and molecular allergenicity of phenylcoumaran benzylic ether reductase, an olive pollen (Ole e 12) allergen.

Authors:  Jose C Jimenez-Lopez; Simeon O Kotchoni; Maria C Hernandez-Soriano; Emma W Gachomo; Juan D Alché
Journal:  J Comput Aided Mol Des       Date:  2013-10-24       Impact factor: 3.686

6.  Steroid Degradation in Comamonas testosteroni TA441: Identification of the Entire β-Oxidation Cycle of the Cleaved B Ring.

Authors:  Masae Horinouchi; Hiroyuki Koshino; Michal Malon; Hiroshi Hirota; Toshiaki Hayashi
Journal:  Appl Environ Microbiol       Date:  2019-10-01       Impact factor: 4.792

7.  Dual-substrate specificity short chain retinol dehydrogenases from the vertebrate retina.

Authors:  Françoise Haeseleer; Geeng-Fu Jang; Yoshikazu Imanishi; Carola A G G Driessen; Masazumi Matsumura; Peter S Nelson; Krzysztof Palczewski
Journal:  J Biol Chem       Date:  2002-09-10       Impact factor: 5.157

8.  Engineering cofactor preference of ketone reducing biocatalysts: A mutagenesis study on a γ-diketone reductase from the yeast Saccharomyces cerevisiae serving as an example.

Authors:  Michael Katzberg; Nàdia Skorupa-Parachin; Marie-Françoise Gorwa-Grauslund; Martin Bertau
Journal:  Int J Mol Sci       Date:  2010-04-14       Impact factor: 5.923

9.  The essential function of genes for a hydratase and an aldehyde dehydrogenase for growth of Pseudomonas sp. strain Chol1 with the steroid compound cholate indicates an aldolytic reaction step for deacetylation of the side chain.

Authors:  Johannes Holert; Nina Jagmann; Bodo Philipp
Journal:  J Bacteriol       Date:  2013-05-24       Impact factor: 3.490

Review 10.  Medium- and short-chain dehydrogenase/reductase gene and protein families : the SDR superfamily: functional and structural diversity within a family of metabolic and regulatory enzymes.

Authors:  K L Kavanagh; H Jörnvall; B Persson; U Oppermann
Journal:  Cell Mol Life Sci       Date:  2008-12       Impact factor: 9.261

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