Literature DB >> 11003701

Genomic homology of the domestic ferret with cats and humans.

P Cavagna1, A Menotti, R Stanyon.   

Abstract

We used chromosome paints from both the domestic cat and humans to directly establish chromosomal homology between the genome of these species and the domestic ferret. The chromosome painting data indicate that the ferret has a highly conserved karyotype closer to the ancestral carnivore karyotype than that of the cat. The cat chromosome paints revealed 22 homologous autosomal regions in the ferret genome: 16 ferret chromosomes were hybridized by a single cat paint, while 3 ferret chromosomes were hybridized by two cat paints. In situ hybridization combined with banding showed that ferret Chromosome (Chr) 1 = cat A2p/C2, Chr 2 = F2/C1q, and Chr 3 = A2q/D2. Five ferret chromosomes are homologous to single arms of cat chromosomes: ferret 4 = A1q, 5 = B1q, 6 = C1p, 10 = A1p, and 12 = B1p. The human chromosome paints revealed 32 + XY homologous regions in the ferret genome: 9 ferret chromosomes were each hybridized by a single human paint, 7 by two paints, 3 by three paints. The 10 ferret chromosomes hybridized by multiple human paints produced the following associations: ferret 1 = human 19/3/21, 2 = 8q/2q, 3 = 10/7, 5 = 8/4, 8 = 15/14, 9 = 10/12/22, 11 = 20/2, 12 = 8/4, 14 = 12/22/18, 18 = 19/16. We present an index of genomic diversity, Z, based on the relative number of conserved whole chromosome and chromosome segments as a preliminary statistic for rapid comparison between species. The index of diversity between human-ferret (Z = 0. 812) is slightly less than human-cat (Z = 0.843). The homology data presented here allow us to transfer gene mapping data from both cats and humans to the ferret.

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Year:  2000        PMID: 11003701     DOI: 10.1007/s003350010172

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  17 in total

1.  Comparative genome maps of the pangolin, hedgehog, sloth, anteater and human revealed by cross-species chromosome painting: further insight into the ancestral karyotype and genome evolution of eutherian mammals.

Authors:  Fengtang Yang; Alexander S Graphodatsky; Tangliang Li; Beiyuan Fu; Gauthier Dobigny; Jinghuan Wang; Polina L Perelman; Natalya A Serdukova; Weiting Su; Patricia Cm O'Brien; Yingxiang Wang; Malcolm A Ferguson-Smith; Vitaly Volobouev; Wenhui Nie
Journal:  Chromosome Res       Date:  2006-04-20       Impact factor: 5.239

2.  A comparative ZOO-FISH analysis in bats elucidates the phylogenetic relationships between Megachiroptera and five microchiropteran families.

Authors:  M Volleth; K G Heller; R A Pfeiffer; H Hameister
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

3.  Tropomyosin variants describe distinct functional subcellular domains in differentiated vascular smooth muscle cells.

Authors:  Cynthia Gallant; Sarah Appel; Philip Graceffa; Paul Leavis; Jim Jung-Ching Lin; Peter W Gunning; Galina Schevzov; Christine Chaponnier; Jon DeGnore; William Lehman; Kathleen G Morgan
Journal:  Am J Physiol Cell Physiol       Date:  2011-02-02       Impact factor: 4.249

4.  Derivation of induced pluripotent stem cells from ferret somatic cells.

Authors:  Jinghui Gao; Sophia Petraki; Xingshen Sun; Leonard A Brooks; Thomas J Lynch; Chih-Lin Hsieh; Reem Elteriefi; Zareeb Lorenzana; Vasu Punj; John F Engelhardt; Kalpaj R Parekh; Amy L Ryan
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2020-02-19       Impact factor: 5.464

5.  Black rat ( Rattus rattus) genomic variability characterized by chromosome painting.

Authors:  Pietro Cavagna; Gary Stone; Roscoe Stanyon
Journal:  Mamm Genome       Date:  2002-03       Impact factor: 2.957

6.  Characterization of White Matter Tracts by Diffusion MR Tractography in Cat and Ferret that Have Similar Gyral Patterns.

Authors:  Avilash Das; Emi Takahashi
Journal:  Cereb Cortex       Date:  2018-04-01       Impact factor: 5.357

7.  Chromosome painting shows that skunks (Mephitidae, Carnivora) have highly rearranged karyotypes.

Authors:  P L Perelman; A S Graphodatsky; J W Dragoo; N A Serdyukova; G Stone; P Cavagna; A Menotti; W Nie; P C M O'Brien; J Wang; S Burkett; K Yuki; M E Roelke; S J O'Brien; F Yang; R Stanyon
Journal:  Chromosome Res       Date:  2008-11-25       Impact factor: 5.239

8.  Phylogenomics of the dog and fox family (Canidae, Carnivora) revealed by chromosome painting.

Authors:  Alexander S Graphodatsky; Polina L Perelman; Natalya V Sokolovskaya; Violetta R Beklemisheva; Natalya A Serdukova; Gauthier Dobigny; Stephen J O'Brien; Malcolm A Ferguson-Smith; Fengtang Yang
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

9.  The genome phylogeny of domestic cat, red panda and five mustelid species revealed by comparative chromosome painting and G-banding.

Authors:  Wenhui Nie; Jinhuan Wang; Patricia C M O'Brien; Beiyuan Fu; Tian Ying; Malcolm A Ferguson-Smith; Fengtang Yang
Journal:  Chromosome Res       Date:  2002       Impact factor: 5.239

10.  The pro-apoptotic protein Par-4 facilitates vascular contractility by cytoskeletal targeting of ZIPK.

Authors:  Susanne Vetterkind; Kathleen G Morgan
Journal:  J Cell Mol Med       Date:  2008-05-24       Impact factor: 5.310

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