Literature DB >> 10997877

Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

T Nagase1, R Kikuno, M Nakayama, M Hirosawa, O Ohara.   

Abstract

In our series of human cDNA projects for accumulating sequence information on the coding sequences of unidentified genes, we herein present the entire sequences of 100 cDNA clones of unidentified genes, named KIAA1544 to KIAA1643, from two sets of size-fractionated human adult and fetal brain cDNA libraries. The average sizes of the inserts and corresponding open reading frames of cDNA clones analyzed here reached 4.6 kb and 2.8 kb (930 amino acid residues), respectively. By computer-assisted database search of the deduced amino acid sequences, 48 predicted gene products were classified into the five functional categories of proteins relating to cell signaling/communication, nucleic acid management, cell structure/motility, protein management and metabolism. Homology search against the databases for proteins deduced from yeast, nematode and fly full genome sequences revealed only one gene (KIAA1630) was entirely conserved among human and these three organisms in the 100 genes reported here. Additionally, their chromosomal loci were determined by using human-rodent hybrid panels unless they were already assigned in the public databases. Furthermore, the expression profiles of the genes were also studied in 10 human tissues, 8 brain regions, spinal cord, fetal brain and fetal liver by reverse transcription-coupled polymerase chain reaction, products of which were quantified by enzyme-linked immunosorbent assay.

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Year:  2000        PMID: 10997877     DOI: 10.1093/dnares/7.4.271

Source DB:  PubMed          Journal:  DNA Res        ISSN: 1340-2838            Impact factor:   4.458


  35 in total

1.  Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs.

Authors:  Manabu Nakayama; Reiko Kikuno; Osamu Ohara
Journal:  Genome Res       Date:  2002-11       Impact factor: 9.043

2.  Complete human gene structure of obscurin: implications for isoform generation by differential splicing.

Authors:  Atsushi Fukuzawa; Seraphina Idowu; Mathias Gautel
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3.  Crystal structure of the BEACH domain reveals an unusual fold and extensive association with a novel PH domain.

Authors:  Gerwald Jogl; Yang Shen; Damara Gebauer; Jiang Li; Katja Wiegmann; Hamid Kashkar; Martin Krönke; Liang Tong
Journal:  EMBO J       Date:  2002-09-16       Impact factor: 11.598

4.  Alternatively spliced Robo2 isoforms in zebrafish and rat.

Authors:  Ertugrul Dalkic; Cem Kuscu; Ceren Sucularli; Iraz T Aydin; Kamil C Akcali; Ozlen Konu
Journal:  Dev Genes Evol       Date:  2006-04-20       Impact factor: 0.900

Review 5.  Regulation of constitutive and inducible AHR signaling: complex interactions involving the AHR repressor.

Authors:  Mark E Hahn; Lenka L Allan; David H Sherr
Journal:  Biochem Pharmacol       Date:  2008-09-20       Impact factor: 5.858

Review 6.  Muscle giants: molecular scaffolds in sarcomerogenesis.

Authors:  Aikaterini Kontrogianni-Konstantopoulos; Maegen A Ackermann; Amber L Bowman; Solomon V Yap; Robert J Bloch
Journal:  Physiol Rev       Date:  2009-10       Impact factor: 37.312

Review 7.  Somatic Mutations and Clonal Hematopoiesis: Unexpected Potential New Drivers of Age-Related Cardiovascular Disease.

Authors:  José J Fuster; Kenneth Walsh
Journal:  Circ Res       Date:  2018-02-02       Impact factor: 17.367

8.  Non-parametric Survival Analysis of EPG5 Gene with Age at Onset of Alzheimer's Disease.

Authors:  Ke-Sheng Wang; Xuefeng Liu; Changchun Xie; Ying Liu; Chun Xu
Journal:  J Mol Neurosci       Date:  2016-09-01       Impact factor: 3.444

Review 9.  The molecular biology of WHO grade I astrocytomas.

Authors:  Nicholas F Marko; Robert J Weil
Journal:  Neuro Oncol       Date:  2012-10-22       Impact factor: 12.300

10.  Targeted deletion of the zebrafish obscurin A RhoGEF domain affects heart, skeletal muscle and brain development.

Authors:  Maide O Raeker; Ashley N Bieniek; Alison S Ryan; Huai-Jen Tsai; Katelin M Zahn; Mark W Russell
Journal:  Dev Biol       Date:  2009-11-26       Impact factor: 3.582

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