Literature DB >> 10985768

Changes in the apomyoglobin folding pathway caused by mutation of the distal histidine residue.

C Garcia1, C Nishimura, S Cavagnero, H J Dyson, P E Wright.   

Abstract

Factors governing the folding pathways and the stability of apomyoglobin have been examined by replacing the distal histidine at position 64 with phenylalanine (H64F). Acid and urea-induced unfolding experiments using CD and fluorescence techniques reveal that the mutant H64F apoprotein is significantly more stable than wild-type apoMb. Kinetic refolding studies of this variant also show a significant difference from wild-type apoMb. The amplitude of the burst phase ellipticity in stopped-flow CD measurements is increased over that of wild-type, an indication that the secondary structure content of the earliest kinetic intermediate is greater in the mutant than in the wild-type protein. In addition, the overall rate of folding is markedly increased. Hydrogen exchange pulse labeling was used to establish the structure of the initial intermediate formed during the burst phase of the H64F mutant. NMR analysis of the samples obtained at different refolding times indicates that the burst phase intermediate contains a stabilized E helix as well as the A, G, and H helices previously found in the wild-type kinetic intermediate. Replacement of the polar distal histidine residue with a nonpolar residue of similar size and shape appears to stabilize the E helix in the early stages of folding due to improved hydrophobic packing. The presence of a hydrophilic histidine at position 64 thus exacts a price in the stability and folding efficiency of the apoprotein, but this residue is nevertheless highly conserved among myoglobins due to its importance in function.

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Year:  2000        PMID: 10985768     DOI: 10.1021/bi0010266

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  24 in total

1.  An amino acid code for protein folding.

Authors:  J Rumbley; L Hoang; L Mayne; S W Englander
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-02       Impact factor: 11.205

2.  Collapse and search dynamics of apomyoglobin folding revealed by submillisecond observations of alpha-helical content and compactness.

Authors:  Takanori Uzawa; Shuji Akiyama; Tetsunari Kimura; Satoshi Takahashi; Koichiro Ishimori; Isao Morishima; Tetsuro Fujisawa
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-07       Impact factor: 11.205

3.  Folding lambda-repressor at its speed limit.

Authors:  Wei Yuan Yang; Martin Gruebele
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

4.  Structural characterization of apomyoglobin self-associated species in aqueous buffer and urea solution.

Authors:  Charles Chow; Nese Kurt; Regina M Murphy; Silvia Cavagnero
Journal:  Biophys J       Date:  2005-10-07       Impact factor: 4.033

5.  Three-state protein folding: experimental determination of free-energy profile.

Authors:  Ekaterina N Baryshnikova; Bogdan S Melnik; Alexei V Finkelstein; Gennady V Semisotnov; Valentina E Bychkova
Journal:  Protein Sci       Date:  2005-09-09       Impact factor: 6.725

6.  Multiple routes lead to the native state in the energy landscape of the beta-trefoil family.

Authors:  Leslie L Chavez; Shachi Gosavi; Patricia A Jennings; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

7.  The role of hydrophobic interactions in initiation and propagation of protein folding.

Authors:  H Jane Dyson; Peter E Wright; Harold A Scheraga
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-17       Impact factor: 11.205

Review 8.  Protein folding and misfolding: mechanism and principles.

Authors:  S Walter Englander; Leland Mayne; Mallela M G Krishna
Journal:  Q Rev Biophys       Date:  2008-04-14       Impact factor: 5.318

9.  Consequences of stabilizing the natively disordered f helix for the folding pathway of apomyoglobin.

Authors:  Chiaki Nishimura; H Jane Dyson; Peter E Wright
Journal:  J Mol Biol       Date:  2011-05-27       Impact factor: 5.469

10.  The kinetic and equilibrium molten globule intermediates of apoleghemoglobin differ in structure.

Authors:  Chiaki Nishimura; H Jane Dyson; Peter E Wright
Journal:  J Mol Biol       Date:  2008-03-19       Impact factor: 5.469

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