Literature DB >> 10985764

Kinetic mechanism of the beta-lactam synthetase of Streptomyces clavuligerus.

B O Bachmann1, C A Townsend.   

Abstract

Streptomyces clavuligerus beta-lactam synthetase (beta-LS) was recently demonstrated to catalyze an early step in clavulanic acid biosynthesis, the ATP/Mg(2+)-dependent intramolecular closure of the beta-amino acid N(2)-(carboxyethyl)-L-arginine (CEA) to the monocyclic beta-lactam deoxyguanidinoproclavaminic acid (DGPC). Here we investigate the steady-state kinetic mechanism of the beta-LS-catalyzed reaction to better understand this unprecedented secondary metabolic enzyme. Initial velocity patterns were consistent with a sequential ordered bi-ter kinetic mechanism. Product inhibition studies with PP(i) and DGPC demonstrated competitive inhibition versus their cognate substrates ATP and CEA, respectively, and noncompetitive inhibition against their noncognate substrates. To clarify the order of substrate binding, the truncated substrate analogue N(2)-(carboxymethyl)-L-arginine was synthesized and demonstrated uncompetitive inhibition versus ATP and competitive patterns versus CEA. These data are consistent with ordered substrate binding, with ATP binding first, an abortive enzyme-DGPC complex, and PP(i) released as the last product. The pH dependence of V and V/K was determined and suggests that residues with a pK of 6.5 and 9.3 must be ionized for optimal activity. These observations were considered in the context of investigations of the homologous primary metabolic enzyme asparagine synthetase B, and a chemical mechanism is proposed that is consistent with the kinetic mechanism.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10985764     DOI: 10.1021/bi000709i

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Dissection of the stepwise mechanism to beta-lactam formation and elucidation of a rate-determining conformational change in beta-lactam synthetase.

Authors:  Mary L Raber; Michael F Freeman; Craig A Townsend
Journal:  J Biol Chem       Date:  2008-10-27       Impact factor: 5.157

2.  The catalytic cycle of beta -lactam synthetase observed by x-ray crystallographic snapshots.

Authors:  Matthew T Miller; Brian O Bachmann; Craig A Townsend; Amy C Rosenzweig
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-30       Impact factor: 11.205

3.  Definition of the common and divergent steps in carbapenem β-lactam antibiotic biosynthesis.

Authors:  Micah J Bodner; Rongfeng Li; Ryan M Phelan; Michael F Freeman; Kristos A Moshos; Evan P Lloyd; Craig A Townsend
Journal:  Chembiochem       Date:  2011-08-24       Impact factor: 3.164

4.  A conserved glutamate controls the commitment to acyl-adenylate formation in asparagine synthetase.

Authors:  Megan E Meyer; Jemy A Gutierrez; Frank M Raushel; Nigel G J Richards
Journal:  Biochemistry       Date:  2010-11-02       Impact factor: 3.162

5.  Engineering the synthetic potential of β-lactam synthetase and the importance of catalytic loop dynamics.

Authors:  Jason W Labonte; Fumitaka Kudo; Michael F Freeman; Mary L Raber; Craig A Townsend
Journal:  Medchemcomm       Date:  2012-01-01       Impact factor: 3.597

6.  A conserved lysine in beta-lactam synthetase assists ring cyclization: Implications for clavam and carbapenem biosynthesis.

Authors:  Mary L Raber; Alvaro Castillo; Alexander Greer; Craig A Townsend
Journal:  Chembiochem       Date:  2009-12-14       Impact factor: 3.164

7.  Two proteins with ornithine acetyltransferase activity show different functions in Streptomyces clavuligerus: Oat2 modulates clavulanic acid biosynthesis in response to arginine.

Authors:  A de la Fuente; J F Martín; A Rodríguez-García; P Liras
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

8.  A conserved tyrosyl-glutamyl catalytic dyad in evolutionarily linked enzymes: carbapenam synthetase and beta-lactam synthetase.

Authors:  Mary L Raber; Samantha O Arnett; Craig A Townsend
Journal:  Biochemistry       Date:  2009-06-09       Impact factor: 3.162

9.  Rate-limiting steps and role of active site Lys443 in the mechanism of carbapenam synthetase.

Authors:  Samantha O Arnett; Barbara Gerratana; Craig A Townsend
Journal:  Biochemistry       Date:  2007-07-21       Impact factor: 3.162

Review 10.  Clavulanic Acid Production by Streptomyces clavuligerus: Insights from Systems Biology, Strain Engineering, and Downstream Processing.

Authors:  Víctor A López-Agudelo; David Gómez-Ríos; Howard Ramirez-Malule
Journal:  Antibiotics (Basel)       Date:  2021-01-18
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.