Literature DB >> 10974559

Control of gene expression through regulation of the TATA-binding protein.

B F Pugh1.   

Abstract

The assembly of transcription complexes at eukaryotic promoters involves a number of distinct steps including chromatin remodeling, and recruitment of a TATA-binding protein (TBP)-containing complexes, the RNA polymerase II holoenzyme. Each of these stages is controlled by both positive and negative factors. In this review, mechanisms that regulate the interactions of TBP with promoter DNA are described. The first is autorepression, where TBP sequesters its DNA-binding surface through dimerization. Once TBP is bound to DNA, factors such as TAF(II)250 and Mot1 induce TBP to dissociate, while other factors such as NC2 and the NOT complex convert the TBP/DNA complex into an inactive state. TFIIA antagonizes these TBP repressors but may be effective only in conjunction with the recruitment of the RNA polymerase II holoenzyme by promoter-bound activators. Taken together, the ability to induce a gene may depend minimally upon the ability to remodel chromatin as well as alleviate direct repression of TBP and other components of the general transcription machinery. The magnitude by which an activated gene is expressed, and thus repeatedly transcribed, might depend in part on competition between TBP inhibitors and the holoenzyme for access to the TBP/TATA complex.

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Year:  2000        PMID: 10974559     DOI: 10.1016/s0378-1119(00)00288-2

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  73 in total

1.  Activator-mediated disruption of sequence-specific DNA contacts by the general transcription factor TFIIB.

Authors:  R Evans; J A Fairley; S G Roberts
Journal:  Genes Dev       Date:  2001-11-15       Impact factor: 11.361

2.  The yeast protein Xtc1 functions as a direct transcriptional repressor.

Authors:  Ana Traven; Lidija Staresincić; Milica Arnerić; Mary Sopta
Journal:  Nucleic Acids Res       Date:  2002-06-01       Impact factor: 16.971

3.  GAGA factor and the TFIID complex collaborate in generating an open chromatin structure at the Drosophila melanogaster hsp26 promoter.

Authors:  Boris A Leibovitch; Quinn Lu; Lawrence R Benjamin; Yingyun Liu; David S Gilmour; Sarah C R Elgin
Journal:  Mol Cell Biol       Date:  2002-09       Impact factor: 4.272

4.  DNA affinity capture and protein profiling by SELDI-TOF mass spectrometry: effect of DNA methylation.

Authors:  Thomas K Bane; James F LeBlanc; Terry D Lee; Arthur D Riggs
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

Review 5.  Expression of nonclassical MHC class Ib genes: comparison of regulatory elements.

Authors:  T Kevin Howcroft; Dinah S Singer
Journal:  Immunol Res       Date:  2003       Impact factor: 2.829

6.  High-affinity DNA binding by a Mot1p-TBP complex: implications for TAF-independent transcription.

Authors:  Orlando H Gumbs; Allyson M Campbell; P Anthony Weil
Journal:  EMBO J       Date:  2003-06-16       Impact factor: 11.598

7.  The cauliflower mosaic virus 35S promoter extends into the transcribed region.

Authors:  Sandra Pauli; Helen M Rothnie; Gang Chen; Xiaoyuan He; Thomas Hohn
Journal:  J Virol       Date:  2004-11       Impact factor: 5.103

8.  The cellular TATA binding protein is required for rep-dependent replication of a minimal adeno-associated virus type 2 p5 element.

Authors:  Achille François; Mickaël Guilbaud; Rafi Awedikian; Gilliane Chadeuf; Philippe Moullier; Anna Salvetti
Journal:  J Virol       Date:  2005-09       Impact factor: 5.103

Review 9.  How eukaryotic genes are transcribed.

Authors:  Bryan J Venters; B Franklin Pugh
Journal:  Crit Rev Biochem Mol Biol       Date:  2009-06       Impact factor: 8.250

10.  An evolutionarily conserved Myostatin proximal promoter/enhancer confers basal levels of transcription and spatial specificity in vivo.

Authors:  Carla Vermeulen Carvalho Grade; Mônica Senna Salerno; Frank R Schubert; Susanne Dietrich; Lúcia Elvira Alvares
Journal:  Dev Genes Evol       Date:  2010-01-06       Impact factor: 0.900

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