Literature DB >> 10972763

Highly reliable genetic identification of individual northern hairy-nosed wombats from single remotely collected hairs: a feasible censusing method.

M A Sloane1, P Sunnucks, D Alpers, L B Beheregaray, A C Taylor.   

Abstract

The highly endangered northern hairy-nosed wombat (Lasiorhinus krefftii) is extremely difficult to study in the wild, and its numbers correspondingly difficult to estimate. Disturbance to the animals caused by trapping and radio-tracking may not only constitute an excessive risk to the population's viability, but may also yield biased data. The results of a pilot study are presented, which clearly show noninvasive genotyping to be a highly feasible and reliable alternative censusing method for L. krefftii. The protocol can identify individual wombats from single hairs collected remotely at burrow entrances, using: (i) a panel of microsatellite markers giving individual-specific genotypes; and (ii) a Y-linked sexing marker in combination with a single-copy X-linked amplification control. Using just the eight most variable microsatellites (of 20 available), only one in 200 pairs of full-sibs are predicted to share the same genotype. From 12 wombat hair samples collected on tape suspended over burrow entrances, three known female, two known male and an unknown wombat of each sex were identified. The approach will allow censusing of individuals that evade capture, and will also reveal some otherwise problematic aspects of the behaviour of this elusive animal.

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Year:  2000        PMID: 10972763     DOI: 10.1046/j.1365-294x.2000.00993.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  8 in total

1.  Development and testing of an optimized method for DNA-based identification of jaguar (Panthera onca) and puma (Puma concolor) faecal samples for use in ecological and genetic studies.

Authors:  Taiana Haag; Anelisie S Santos; Carlos De Angelo; Ana Carolina Srbek-Araujo; Dênis A Sana; Ronaldo G Morato; Francisco M Salzano; Eduardo Eizirik
Journal:  Genetica       Date:  2009-01-10       Impact factor: 1.082

2.  Genotyping faecal samples of Bengal tiger Panthera tigris tigris for population estimation: a pilot study.

Authors:  Jyotsna Bhagavatula; Lalji Singh
Journal:  BMC Genet       Date:  2006-10-17       Impact factor: 2.797

3.  Where have all the tadpoles gone? Individual genetic tracking of amphibian larvae until adulthood.

Authors:  Eva Ringler; Rosanna Mangione; Max Ringler
Journal:  Mol Ecol Resour       Date:  2014-11-26       Impact factor: 7.090

4.  Evidence of Subdivisions on Evolutionary Timescales in a Large, Declining Marsupial Distributed across a Phylogeographic Barrier.

Authors:  Deryn L Alpers; Faith M Walker; Andrea C Taylor; Paul Sunnucks; Steven Bellman; Birgita D Hansen; William B Sherwin
Journal:  PLoS One       Date:  2016-10-12       Impact factor: 3.240

5.  How genetic data improve the interpretation of results of faecal glucocorticoid metabolite measurements in a free-living population.

Authors:  Maik Rehnus; Rupert Palme
Journal:  PLoS One       Date:  2017-08-23       Impact factor: 3.240

Review 6.  Beyond Biodiversity: Can Environmental DNA (eDNA) Cut It as a Population Genetics Tool?

Authors:  Clare I M Adams; Michael Knapp; Neil J Gemmell; Gert-Jan Jeunen; Michael Bunce; Miles D Lamare; Helen R Taylor
Journal:  Genes (Basel)       Date:  2019-03-01       Impact factor: 4.096

7.  A panel of microsatellites to individually identify leopards and its application to leopard monitoring in human dominated landscapes.

Authors:  Samrat Mondol; R Navya; Vidya Athreya; Kartik Sunagar; Velu Mani Selvaraj; Uma Ramakrishnan
Journal:  BMC Genet       Date:  2009-12-04       Impact factor: 2.797

8.  Using pedigree reconstruction to estimate population size: genotypes are more than individually unique marks.

Authors:  Scott Creel; Elias Rosenblatt
Journal:  Ecol Evol       Date:  2013-04-08       Impact factor: 2.912

  8 in total

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