Literature DB >> 10970557

Pulling pinned polymers and unzipping DNA.

D K Lubensky1, D R Nelson.   

Abstract

We study a class of micromanipulation experiments, exemplified by the pulling apart of the two strands of double-stranded DNA. When the pulling force is increased to a critical value, an "unzipping" transition occurs. For random DNA sequences with short-ranged correlations, we obtain exact results for the number of monomers liberated and the specific heat, including the critical behavior at the transition. Related systems include a random heteropolymer pulled away from an adsorbing surface and a vortex line in a type II superconductor tilted away from a fragmented columnar defect.

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Year:  2000        PMID: 10970557     DOI: 10.1103/PhysRevLett.85.1572

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  27 in total

1.  Force-induced denaturation of RNA.

Authors:  U Gerland; R Bundschuh; T Hwa
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

2.  Force and kinetic barriers to unzipping of the DNA double helix.

Authors:  S Cocco; R Monasson; J F Marko
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-10       Impact factor: 11.205

3.  Unzipping DNA with optical tweezers: high sequence sensitivity and force flips.

Authors:  U Bockelmann; Ph Thomen; B Essevaz-Roulet; V Viasnoff; F Heslot
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

4.  Protein-DNA computation by stochastic assembly cascade.

Authors:  Roy Bar-Ziv; Tsvi Tlusty; Albert Libchaber
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-19       Impact factor: 11.205

Review 5.  Mechanics and imaging of single DNA molecules.

Authors:  M Hegner; W Grange
Journal:  J Muscle Res Cell Motil       Date:  2002       Impact factor: 2.698

6.  DNA unzipped under a constant force exhibits multiple metastable intermediates.

Authors:  Claudia Danilowicz; Vincent W Coljee; Cedric Bouzigues; David K Lubensky; David R Nelson; Mara Prentiss
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-06       Impact factor: 11.205

7.  Dynamics of molecular motors and polymer translocation with sequence heterogeneity.

Authors:  Yariv Kafri; David K Lubensky; David R Nelson
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

8.  Dynamics of the DNA duplex formation studied by single molecule force measurements.

Authors:  U Bockelmann; P Thomen; F Heslot
Journal:  Biophys J       Date:  2004-08-31       Impact factor: 4.033

9.  Thermal fluctuation spectroscopy of DNA thermal denaturation.

Authors:  K S Nagapriya; A K Raychaudhuri
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

10.  Physical origin of DNA unzipping.

Authors:  Sitichoke Amnuanpol
Journal:  J Biol Phys       Date:  2015-08-26       Impact factor: 1.365

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