Literature DB >> 10970288

A convenient method for the synthesis of DNA-recognizing polyamides in solution.

J Xiao1, G Yuan, W Huang, A S Chan, K L Lee.   

Abstract

A convenient method for the synthesis of polyamides containing N-methylpyrrole (Py) and N-methylimidazole (Im) in solution has been developed. Most of the building blocks have been prepared by a haloform reaction in a simple way that column chromatography can be avoided. By use of the DCC/HOBT coupling reaction, the building blocks prepared have been effectively connected to construct a variety of subchains and polyamides without employing amino protection and deprotection. By use of the present method, an eight-ring polyamide, PyPyPyPygammaPyImImPybetaDp (gamma is gamma-aminobutyric acid, beta is beta-alanine, Dp is N, N-dimethylpropyldiamine), has been synthesized by the coupling of two four-ring subchains in one step.

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Year:  2000        PMID: 10970288     DOI: 10.1021/jo000135n

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  8 in total

1.  Modulation of DNA-polyamide interaction by β-alanine substitutions: a study of positional effects on binding affinity, kinetics and thermodynamics.

Authors:  Shuo Wang; Karl Aston; Kevin J Koeller; G Davis Harris; Nigam P Rath; James K Bashkin; W David Wilson
Journal:  Org Biomol Chem       Date:  2014-10-14       Impact factor: 3.876

2.  HPV episome levels are potently decreased by pyrrole-imidazole polyamides.

Authors:  Terri G Edwards; Kevin J Koeller; Urszula Slomczynska; Kam Fok; Michael Helmus; James K Bashkin; Chris Fisher
Journal:  Antiviral Res       Date:  2011-06-02       Impact factor: 5.970

3.  Investigation of noncovalent complexes between beta-cyclodextrin and polyamide acids containing N-methylpyrrole and N-methylimidazole by electrospray ionization mass spectrometry.

Authors:  Huihui Li; Jiang Zhou; Feili Tang; Gu Yuan
Journal:  J Am Soc Mass Spectrom       Date:  2005-12-09       Impact factor: 3.109

4.  Evaluation of binding selectivity of a polyamide probe to single base-pair different DNA in A.T-rich region by electrospray ionization mass spectrometry.

Authors:  Huihui Li; Gu Yuan
Journal:  J Am Soc Mass Spectrom       Date:  2006-09-11       Impact factor: 3.109

5.  Oligomerization route to Py-Im polyamide macrocycles.

Authors:  David M Chenoweth; Daniel A Harki; Peter B Dervan
Journal:  Org Lett       Date:  2009-08-20       Impact factor: 6.005

6.  Solution-phase synthesis of pyrrole-imidazole polyamides.

Authors:  David M Chenoweth; Daniel A Harki; Peter B Dervan
Journal:  J Am Chem Soc       Date:  2009-05-27       Impact factor: 15.419

7.  DNA Binding Polyamides and the Importance of DNA Recognition in their use as Gene-Specific and Antiviral Agents.

Authors:  Kevin J Koeller; G Davis Harris; Karl Aston; Gaofei He; Carlos H Castaneda; Melissa A Thornton; Terri G Edwards; Shuo Wang; Rupesh Nanjunda; W David Wilson; Chris Fisher; James K Bashkin
Journal:  Med Chem (Los Angeles)       Date:  2014-02-20

8.  Microwave assisted synthesis of Py-Im polyamides.

Authors:  James W Puckett; Joshua T Green; Peter B Dervan
Journal:  Org Lett       Date:  2012-05-11       Impact factor: 6.005

  8 in total

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