Literature DB >> 10956039

Electron transfer between the quinones in the photosynthetic reaction center and its coupling to conformational changes.

B Rabenstein1, G M Ullmann, E W Knapp.   

Abstract

The electron transfer between the two quinones Q(A) and Q(B) in the bacterial photosynthetic reaction center (bRC) is coupled to a conformational rearrangement. Recently, the X-ray structures of the dark-adapted and light-exposed bRC from Rhodobacter sphaeroides were solved, and the conformational changes were characterized structurally. We computed the reaction free energy for the electron transfer from to Q(B) in the X-ray structures of the dark-adapted and light-exposed bRC from Rb. sphaeroides. The computation was done by applying an electrostatic model using the Poisson-Boltzmann equation and Monte Carlo sampling. We accounted for possible protonation changes of titratable groups upon electron transfer. According to our calculations, the reaction energy of the electron transfer from to Q(B) is +157 meV for the dark-adapted and -56 meV for the light-exposed X-ray structure; i.e., the electron transfer is energetically uphill for the dark-adapted structure and downhill for the light-exposed structure. A common interpretation of experimental results is that the electron transfer between and Q(B) is either gated or at least influenced by a conformational rearrangement: A conformation in which the electron transfer from to Q(B) is inactive, identified with the dark-adapted X-ray structure, changes into an electron-transfer active conformation, identified with the light-exposed X-ray structure. This interpretation agrees with our computational results if one assumes that the positive reaction energy for the dark-adapted X-ray structure effectively prevents the electron transfer. We found that the strongly coupled pair of titratable groups Glu-L212 and Asp-L213 binds about one proton in the dark-adapted X-ray structure, where the electron is mainly localized at Q(A), and about two protons in the light-exposed structure, where the electron is mainly localized at Q(B). This finding agrees with recent experimental and theoretical studies. We compare the present results for the bRC from Rb. sphaeroides to our recent studies on the bRC from Rhodopseudomonas viridis. We discuss possible mechanisms for the gated electron transfer from to Q(B) and relate them to theoretical and experimental results.

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10956039     DOI: 10.1021/bi000413c

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  Calculated pH-dependent population and protonation of carbon-monoxy-myoglobin conformers.

Authors:  B Rabenstein; E W Knapp
Journal:  Biophys J       Date:  2001-03       Impact factor: 4.033

2.  Protonation and stability of the globular domain of influenza virus hemagglutinin.

Authors:  Qiang Huang; Robert Opitz; Ernst-Walter Knapp; Andreas Herrmann
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

3.  Key role of proline L209 in connecting the distant quinone pockets in the reaction center of Rhodobacter sphaeroides.

Authors:  J Tandori; P Maroti; E Alexov; P Sebban; L Baciou
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-30       Impact factor: 11.205

4.  The position of QB in the photosynthetic reaction center depends on pH: a theoretical analysis of the proton uptake upon QB reduction.

Authors:  Antoine Taly; Pierre Sebban; Jeremy C Smith; G Matthias Ullmann
Journal:  Biophys J       Date:  2003-03       Impact factor: 4.033

5.  Protein conformational gating of enzymatic activity in xanthine oxidoreductase.

Authors:  Hiroshi Ishikita; Bryan T Eger; Ken Okamoto; Takeshi Nishino; Emil F Pai
Journal:  J Am Chem Soc       Date:  2011-12-29       Impact factor: 15.419

6.  A protein dynamics study of photosystem II: the effects of protein conformation on reaction center function.

Authors:  Sergej Vasil'ev; Doug Bruce
Journal:  Biophys J       Date:  2006-02-03       Impact factor: 4.033

Review 7.  Investigating the mechanisms of photosynthetic proteins using continuum electrostatics.

Authors:  G Matthias Ullmann; Edda Kloppmann; Timm Essigke; Eva-Maria Krammer; Astrid R Klingen; Torsten Becker; Elisa Bombarda
Journal:  Photosynth Res       Date:  2008-05-14       Impact factor: 3.573

8.  Photosynthetic diode: electron transport rectification by wetting the quinone cofactor.

Authors:  Daniel R Martin; Dmitry V Matyushov
Journal:  Phys Chem Chem Phys       Date:  2015-07-14       Impact factor: 3.676

9.  Stigmatellin probes the electrostatic potential in the QB site of the photosynthetic reaction center.

Authors:  László Gerencsér; Bogáta Boros; Valerie Derrien; Deborah K Hanson; Colin A Wraight; Pierre Sebban; Péter Maróti
Journal:  Biophys J       Date:  2015-01-20       Impact factor: 4.033

10.  Time-resolved crystallographic studies of light-induced structural changes in the photosynthetic reaction center.

Authors:  Richard H G Baxter; Nina Ponomarenko; Vukica Srajer; Reinhard Pahl; Keith Moffat; James R Norris
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-08       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.