Literature DB >> 10954730

Dynamical principles in biological processes: a model of charge migration in proteins and DNA.

E W Schlag1, D Y Yang, S Y Sheu, H L Selzle, S H Lin, P M Rentzepis.   

Abstract

The generalized master equations (GMEs) that contain multiple time scales have been derived quantum mechanically. The GME method has then been applied to a model of charge migration in proteins that invokes the hole hopping between local amino acid sites driven by the torsional motions of the floppy backbones. This model is then applied to analyze the experimental results for sequence-dependent long-range hole transport in DNA reported by Meggers et al. [Meggers, E., Michel-Beyerle, M. E., & Giese, B. (1998) J. Am. Chem. Soc. 120, 12950-12955]. The model has also been applied to analyze the experimental results of femtosecond dynamics of DNA-mediated electron transfer reported by Zewail and co-workers [Wan, C., Fiebig, T., Kelley, S. O., Treadway, C. R., Barton, J. K. & Zewail, A. H. (1999) Proc. Natl. Acad. Sci. USA 96, 6014-6019]. The initial events in the dynamics of protein folding have begun to attract attention. The GME obtained in this paper will be applicable to this problem.

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Year:  2000        PMID: 10954730      PMCID: PMC27603          DOI: 10.1073/pnas.140196597

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  6 in total

1.  Long-range charge hopping in DNA.

Authors:  M Bixon; B Giese; S Wessely; T Langenbacher; M E Michel-Beyerle; J Jortner
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-12       Impact factor: 11.205

2.  Femtosecond dynamics of DNA-mediated electron transfer.

Authors:  C Wan; T Fiebig; S O Kelley; C R Treadway; J K Barton; A H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

Review 3.  Fast events in protein folding: the time evolution of primary processes.

Authors:  R H Callender; R B Dyer; R Gilmanshin; W H Woodruff
Journal:  Annu Rev Phys Chem       Date:  1998       Impact factor: 12.703

4.  Dynamical principles in biological processes.

Authors:  E W Schlag; S H Lin; R Weinkauf; P M Rentzepis
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

5.  Oxidative DNA damage through long-range electron transfer.

Authors:  D B Hall; R E Holmlin; J K Barton
Journal:  Nature       Date:  1996-08-22       Impact factor: 49.962

6.  A new pathway for transmembrane electron transfer in photosynthetic reaction centers of Rhodobacter sphaeroides not involving the excited special pair.

Authors:  M E Van Brederode; M R Jones; F Van Mourik; I H Van Stokkum; R Van Grondelle
Journal:  Biochemistry       Date:  1997-06-10       Impact factor: 3.162

  6 in total
  7 in total

1.  Femtosecond direct observation of charge transfer between bases in DNA.

Authors:  C Wan; T Fiebig; O Schiemann; J K Barton; A H Zewail
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  Protein dynamics and electron transfer: electronic decoherence and non-Condon effects.

Authors:  Spiros S Skourtis; Ilya A Balabin; Tsutomu Kawatsu; David N Beratan
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-28       Impact factor: 11.205

3.  Base pair motions control the rates and distance dependencies of reductive and oxidative DNA charge transfer.

Authors:  Linda Valis; Qiang Wang; Milen Raytchev; Ivan Buchvarov; Hans-Achim Wagenknecht; Torsten Fiebig
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

4.  In situ superexchange electron transfer through a single molecule: a rectifying effect.

Authors:  Alexei A Kornyshev; Alexander M Kuznetsov; Jens Ulstrup
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-25       Impact factor: 11.205

5.  Origin of the heterogeneous distribution of the yield of guanyl radical in UV laser photolyzed DNA.

Authors:  Dimitar Angelov; Benedicte Beylot; Annick Spassky
Journal:  Biophys J       Date:  2004-12-21       Impact factor: 4.033

6.  Demonstration of a new biosensing concept for immunodiagnostic applications based on change in surface conductance of antibodies after biomolecular interactions.

Authors:  Sandeep Kumar Vashist; Inderpreet Kaur; Ram Prakash Bajpai; Lalit Mohan Bharadwaj; Rupinder Tewari; Roberto Raiteri
Journal:  J Zhejiang Univ Sci B       Date:  2006-09       Impact factor: 3.066

7.  Formation of molecular radical cations of enkephalin derivatives via collision-induced dissociation of electrospray-generated copper (II) complex ions of amines and peptides.

Authors:  I K Chu; C F Rodriguez; A C Hopkinson; K W Siu; T C Lau
Journal:  J Am Soc Mass Spectrom       Date:  2001-10       Impact factor: 3.109

  7 in total

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