Literature DB >> 10944332

Effects of crystal twinning on the ability to solve a macromolecular structure using multiwavelength anomalous diffraction.

F Yang1, Z Dauter, A Wlodawer.   

Abstract

The crystal structure of gpD, the capsid-stabilizing protein of bacteriophage lambda, was solved by multiwavelength anomalous diffraction (MAD) for a selenomethionine (SeMet) derivative of the protein at 1.8 A resolution, using crystals in space group P2(1) [Yang et al. (2000), Nature Struct. Biol. 7, 230-237]. Subsequent analysis showed that the crystals of both the original protein and the SeMet derivative were pseudo-merohedrally twinned with a twinning fraction approximately 0.36, owing to the near-identity of the a and c axes. An analysis of the crystal structure solution is presented and the utility of twinned crystals for solving the structure using MAD and of different phasing strategies is discussed; the results obtained with several software packages are compared.

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Year:  2000        PMID: 10944332     DOI: 10.1107/s0907444900007162

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  Structure of pyruvate dehydrogenase kinase. Novel folding pattern for a serine protein kinase.

Authors:  C N Steussy; K M Popov; M M Bowker-Kinley; R B Sloan; R A Harris; J A Hamilton
Journal:  J Biol Chem       Date:  2001-08-01       Impact factor: 5.157

2.  Perfect merohedral twinning combined with noncrystallographic symmetry potentially causes the failure of molecular replacement with low-homology search models for the flavin-dependent halogenase HalX from Xanthomonas campestris.

Authors:  Maren Buss; Christina Geerds; Thomas Patschkowski; Karsten Niehaus; Hartmut H Niemann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-05-18       Impact factor: 1.056

3.  Recovery of data from perfectly twinned virus crystals revisited.

Authors:  Helen Mary Ginn; David Ian Stuart
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-05-25       Impact factor: 7.652

4.  Variations on a theme: crystal forms of the amino-acid transporter MhsT.

Authors:  Caroline Neumann; Dorota Focht; Sofia Trampari; Joseph A Lyons; Poul Nissen
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2022-07-26       Impact factor: 1.072

5.  Imperfect pseudo-merohedral twinning in crystals of fungal fatty acid synthase.

Authors:  Simon Jenni; Nenad Ban
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

6.  Surprises and pitfalls arising from (pseudo)symmetry.

Authors:  Peter H Zwart; Ralf W Grosse-Kunstleve; Andrey A Lebedev; Garib N Murshudov; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
  6 in total

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