Literature DB >> 10944266

Electron density and electrostatic properties of two peptide molecules: tyrosyl-glycyl-glycine monohydrate and glycyl-aspartic acid dihydrate.

V Pichon-Pesme1, H Lachekar, M Souhassou, C Lecomte.   

Abstract

The electron density and electrostatic properties of Tyr-Gly-Gly and Gly-Asp molecules have been determined from high-resolution X-ray diffraction data at 123 K. Topological properties of the charge distribution are discussed and compared with those derived from other experimental studies on peptide molecules, and the characteristics of the (3,-1) critical points of the C=O, C-N, C-C bonds are analysed. Crystal data for Tyr-Gly-Gly: C13H17N3O5.H2O, Mr = 313, orthorhombic, P2(1)2(1)2(1), Z = 4, T = 123 +/- 2 K; lattice parameters: a = 7.984 (2), b = 9.535 (3), c = 18.352 (5) A, V= 1397.1 (6) A3, Dx = 1.49 g cm(-3), mu = 1.2 cm(-1) for lambdaMo = 0.7107 A. Crystal data for Gly-Asp: C6H10N2O5.2H2O, Mr = 212, orthorhombic, P2(1)2(1)2(1), Z = 4, T = 123 +/- 2 K; lattice parameters: a = 9.659 (1), b = 9.672 (1), c = 10.739 (1) A, V= 1003.3 (4) A3, Dx = 1.40 g cm(-3), mu = 1.3 cm(-1) for lambda(Mo)= 0.7107 A.

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Year:  2000        PMID: 10944266     DOI: 10.1107/s0108768100004390

Source DB:  PubMed          Journal:  Acta Crystallogr B        ISSN: 0108-7681


  5 in total

1.  Application of charge density methods to a protein model compound: calculation of Coulombic intermolecular interaction energies from the experimental charge density.

Authors:  Xue Li; Guang Wu; Yuriy A Abramov; Anatoliy V Volkov; Philip Coppens
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-09       Impact factor: 11.205

2.  Hydrogen atoms can be located accurately and precisely by x-ray crystallography.

Authors:  Magdalena Woińska; Simon Grabowsky; Paulina M Dominiak; Krzysztof Woźniak; Dylan Jayatilaka
Journal:  Sci Adv       Date:  2016-05-27       Impact factor: 14.136

3.  Topological properties of hydrogen bonds and covalent bonds from charge densities obtained by the maximum entropy method (MEM).

Authors:  Jeanette Netzel; Sander van Smaalen
Journal:  Acta Crystallogr B       Date:  2009-08-28

4.  Polarizable atomic multipole X-ray refinement: application to peptide crystals.

Authors:  Michael J Schnieders; Timothy D Fenn; Vijay S Pande; Axel T Brunger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-08-14

5.  On the use of logarithmic scales for analysis of diffraction data.

Authors:  Alexandre Urzhumtsev; Pavel V Afonine; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-11-17
  5 in total

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