Literature DB >> 10943560

A specialized version of the HD hydrolase domain implicated in signal transduction.

M Y Galperin1, D A Natale, L Aravind, E V Koonin.   

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Year:  1999        PMID： 10943560      PMCID： PMC5330256     

Source DB:  PubMed          Journal:  J Mol Microbiol Biotechnol        ISSN： 1464-1801


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  21 in total

1.  The cytoplasmic helical linker domain of receptor histidine kinase and methyl-accepting proteins is common to many prokaryotic signalling proteins.

Authors:  L Aravind; C P Ponting
Journal:  FEMS Microbiol Lett       Date:  1999-07-01       Impact factor: 2.742

Review 2.  Cellulose biosynthesis and function in bacteria.

Authors:  P Ross; R Mayer; M Benziman
Journal:  Microbiol Rev       Date:  1991-03

3.  Crystal structure of Escherichia coli CheY refined at 1.7-A resolution.

Authors:  K Volz; P Matsumura
Journal:  J Biol Chem       Date:  1991-08-15       Impact factor: 5.157

4.  SMART: identification and annotation of domains from signalling and extracellular protein sequences.

Authors:  C P Ponting; J Schultz; F Milpetz; P Bork
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

Review 5.  Beyond complete genomes: from sequence to structure and function.

Authors:  E V Koonin; R L Tatusov; M Y Galperin
Journal:  Curr Opin Struct Biol       Date:  1998-06       Impact factor: 6.809

6.  The HD domain defines a new superfamily of metal-dependent phosphohydrolases.

Authors:  L Aravind; E V Koonin
Journal:  Trends Biochem Sci       Date:  1998-12       Impact factor: 13.807

7.  Prediction of protein secondary structure at better than 70% accuracy.

Authors:  B Rost; C Sander
Journal:  J Mol Biol       Date:  1993-07-20       Impact factor: 5.469

8.  Replication origin region of the chromosome of alkaliphilic Bacillus halodurans C-125.

Authors:  H Takami; N Masui; K Nakasone; K Horikoshi
Journal:  Biosci Biotechnol Biochem       Date:  1999-06       Impact factor: 2.043

9.  Three cdg operons control cellular turnover of cyclic di-GMP in Acetobacter xylinum: genetic organization and occurrence of conserved domains in isoenzymes.

Authors:  R Tal; H C Wong; R Calhoon; D Gelfand; A L Fear; G Volman; R Mayer; P Ross; D Amikam; H Weinhouse; A Cohen; S Sapir; P Ohana; M Benziman
Journal:  J Bacteriol       Date:  1998-09       Impact factor: 3.490

10.  Response regulators of bacterial signal transduction systems: selective domain shuffling during evolution.

Authors:  G M Pao; M H Saier
Journal:  J Mol Evol       Date:  1995-02       Impact factor: 2.395
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  57 in total

1.  Analysis of the Thermotoga maritima genome combining a variety of sequence similarity and genome context tools.

Authors:  N C Kyrpides; C A Ouzounis; I Iliopoulos; V Vonstein; R Overbeek
Journal:  Nucleic Acids Res       Date:  2000-11-15       Impact factor: 16.971

2.  A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis.

Authors:  Kira S Makarova; L Aravind; Nick V Grishin; Igor B Rogozin; Eugene V Koonin
Journal:  Nucleic Acids Res       Date:  2002-01-15       Impact factor: 16.971

3.  Common extracellular sensory domains in transmembrane receptors for diverse signal transduction pathways in bacteria and archaea.

Authors:  Igor B Zhulin; Anastasia N Nikolskaya; Michael Y Galperin
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

Review 4.  Bacterial signal transduction network in a genomic perspective.

Authors:  Michael Y Galperin
Journal:  Environ Microbiol       Date:  2004-06       Impact factor: 5.491

5.  Cell cycle-dependent dynamic localization of a bacterial response regulator with a novel di-guanylate cyclase output domain.

Authors:  Ralf Paul; Stefan Weiser; Nicholas C Amiot; Carmen Chan; Tilman Schirmer; Bernd Giese; Urs Jenal
Journal:  Genes Dev       Date:  2004-03-15       Impact factor: 11.361

6.  Single-Cell Microscopy Reveals That Levels of Cyclic di-GMP Vary among Bacillus subtilis Subpopulations.

Authors:  Cordelia A Weiss; Jakob A Hoberg; Kuanqing Liu; Benjamin P Tu; Wade C Winkler
Journal:  J Bacteriol       Date:  2019-07-24       Impact factor: 3.490

7.  Cell-cell signaling in Xanthomonas campestris involves an HD-GYP domain protein that functions in cyclic di-GMP turnover.

Authors:  Robert P Ryan; Yvonne Fouhy; Jean F Lucey; Lisa C Crossman; Stephen Spiro; Ya-Wen He; Lian-Hui Zhang; Stephan Heeb; Miguel Cámara; Paul Williams; J Maxwell Dow
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-12       Impact factor: 11.205

8.  Structural classification of bacterial response regulators: diversity of output domains and domain combinations.

Authors:  Michael Y Galperin
Journal:  J Bacteriol       Date:  2006-06       Impact factor: 3.490

Review 9.  Cyclic di-GMP signaling in bacteria: recent advances and new puzzles.

Authors:  Robert P Ryan; Yvonne Fouhy; Jean F Lucey; J Maxwell Dow
Journal:  J Bacteriol       Date:  2006-10-06       Impact factor: 3.490

10.  Identification of c-di-GMP derivatives resistant to an EAL domain phosphodiesterase.

Authors:  Carly A Shanahan; Barbara L Gaffney; Roger A Jones; Scott A Strobel
Journal:  Biochemistry       Date:  2013-01-03       Impact factor: 3.162
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