Literature DB >> 10939407

Improved calibration of time-of-flight mass spectra by simplex optimization of electrostatic ion calculations.

N P Christian1, R J Arnold, J P Reilly.   

Abstract

A novel time-of-flight mass calibration method has been developed. In contrast to conventional methods, where the relationship between ion flight time and mass is an arbitrary polynomial equation, this method is based on the physics of ion motion. Parameters needed to describe the physics are numerically optimized using a simplex algorithm. Once these parameters are established, unknown masses can be determined from their times-of-flight. This calibration method gives intrinsically well-behaved results, since nonlinearities (due to extraction delay, desorption velocity, etc.) are properly taken into account in the time-of-flight calculation. The simplex method is compared to curve fitting for the analysis of time-of-flight data, and some significant advantages are demonstrated. Salient features of the method include greatly improved mass extrapolation accuracy, no loss of interpolated calibration accuracy, the ability to obtain an accurate calibration with a minimal number of calibrants, and the ability to extract unknown parameters such as desorption velocities.

Mesh:

Substances:

Year:  2000        PMID: 10939407     DOI: 10.1021/ac991500h

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  5 in total

1.  Visualization and analysis of molecular scanner peptide mass spectra.

Authors:  Markus Müller; Robin Gras; Ron D Appel; Willy V Bienvenut; Denis F Hochstrasser
Journal:  J Am Soc Mass Spectrom       Date:  2002-03       Impact factor: 3.109

2.  Generation of CsI cluster ions for mass calibration in matrix-assisted laser desorption/ionization mass spectrometry.

Authors:  Xianwen Lou; Joost L J van Dongen; E W Meijer
Journal:  J Am Soc Mass Spectrom       Date:  2010-03-31       Impact factor: 3.109

3.  Elucidation of the initial step of oligonucleotide fragmentation in matrix-assisted laser desorption/ionization using modified nucleic acids.

Authors:  N P Christian; J P Reilly; V R Mokler; F E Wincott; A D Ellington
Journal:  J Am Soc Mass Spectrom       Date:  2001-06       Impact factor: 3.109

4.  Mass recalibration for desorption electrospray ionization mass spectrometry imaging using endogenous reference ions.

Authors:  Paolo Inglese; Helen Xuexia Huang; Vincen Wu; Matthew R Lewis; Zoltan Takats
Journal:  BMC Bioinformatics       Date:  2022-04-15       Impact factor: 3.307

5.  Understanding the characteristics of mass spectrometry data through the use of simulation.

Authors:  Kevin R Coombes; John M Koomen; Keith A Baggerly; Jeffrey S Morris; Ryuji Kobayashi
Journal:  Cancer Inform       Date:  2005
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.