Literature DB >> 10936858

A (GATA)(7) motif located in the 5' boundary area of the human beta-globin locus control region exhibits silencer activity in erythroid cells.

R Ramchandran1, C Bengra, B Whitney, K Lanclos, D Tuan.   

Abstract

A 40-bp DNA, consisting of seven tandem GATA repeats, is located near the HS5 site in the 5' boundary area of the locus control region (LCR) of human beta-globin gene. This (GATA)(7) motif, named 5a, exhibits silencer activity in erythroid cells. In transfected, recombinant plasmids containing the chloramphenicol acetyltransferase (CAT) reporter gene, 5a repressed the activity of the cis-linked housekeeping phosphoglycerate kinase (pgk) promoter; 5a also repressed the activity of the cis-linked HS2 enhancer regardless of whether the CAT gene was driven by the pgk or the epsilon-globin promoter. Repression by 5a was most severe when 5a was spliced upstream of HS2 at a distance of less than 200 bases from the HS2 enhancer core. The silencer activity of 5a was independent of whether the component GATA motifs were in head to tail orientation as in the wild type 5a or in head to head or tail to tail orientation as in a mutant 5a. Band shift experiments show that the GATA-1 protein binds to both 5a and the mutant 5a and forms a large protein complex. Together, the results suggest that GATA-1 bound at 5a is a strong, proximal repressor of HS2 enhancer activity. Copyright 2000 Wiley-Liss, Inc.

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Year:  2000        PMID: 10936858     DOI: 10.1002/1096-8652(200009)65:1<14::aid-ajh3>3.0.co;2-f

Source DB:  PubMed          Journal:  Am J Hematol        ISSN: 0361-8609            Impact factor:   10.047


  7 in total

1.  Silencing of Agamma-globin gene expression during adult definitive erythropoiesis mediated by GATA-1-FOG-1-Mi2 complex binding at the -566 GATA site.

Authors:  Susanna Harju-Baker; Flávia C Costa; Halyna Fedosyuk; Renee Neades; Kenneth R Peterson
Journal:  Mol Cell Biol       Date:  2008-03-17       Impact factor: 4.272

2.  Nuclear matrix association of the human beta-globin locus utilizing a novel approach to quantitative real-time PCR.

Authors:  G Charles Ostermeier; Zhandong Liu; Rui Pires Martins; Rikki R Bharadwaj; James Ellis; Sorin Draghici; Stephen A Krawetz
Journal:  Nucleic Acids Res       Date:  2003-06-15       Impact factor: 16.971

3.  Conserved CTCF insulator elements flank the mouse and human beta-globin loci.

Authors:  Catherine M Farrell; Adam G West; Gary Felsenfeld
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

4.  GATA2-induced silencing and LIM-homeodomain protein-induced activation are mediated by a bi-functional response element in the rat GnRH receptor gene.

Authors:  Anne-Laure Schang; Anne Granger; Bruno Quérat; Christian Bleux; Joëlle Cohen-Tannoudji; Jean-Noël Laverrière
Journal:  Mol Endocrinol       Date:  2012-12-04

5.  Human beta-globin locus control region HS5 contains CTCF- and developmental stage-dependent enhancer-blocking activity in erythroid cells.

Authors:  Keiji Tanimoto; Akiko Sugiura; Akane Omori; Gary Felsenfeld; James Douglas Engel; Akiyoshi Fukamizu
Journal:  Mol Cell Biol       Date:  2003-12       Impact factor: 4.272

6.  NF-Y recruits both transcription activator and repressor to modulate tissue- and developmental stage-specific expression of human γ-globin gene.

Authors:  Xingguo Zhu; Yongchao Wang; Wenhu Pi; Hui Liu; Amittha Wickrema; Dorothy Tuan
Journal:  PLoS One       Date:  2012-10-10       Impact factor: 3.240

7.  MsDetector: toward a standard computational tool for DNA microsatellites detection.

Authors:  Hani Z Girgis; Sergey L Sheetlin
Journal:  Nucleic Acids Res       Date:  2012-10-02       Impact factor: 16.971

  7 in total

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