Literature DB >> 1093141

(dA-dT) dependent inactivation of the DNA template properties by interaction with netropsin and distamycin A.

U Wähnert, O Zimmer, G Luck, O Pitra.   

Abstract

The inhibitory effect of the polypeptide antibiotics netropsin and distamycin A on DNA dependent nucleic acid synthesis has been shown to be related to the base composition of the template DNA. A number of natural DNA's of quite different dA-dT content as well as poly (dI-dC)-poly (dI-dC), poly (dA-dT)-poly (dA-dT), poly (dA) - poly (dT) and poly (dG) - poly (dC) has been studied as templates in DNA and in part in RNA polymerase reaction. The highest binding efficiency of netropsin existing for (dA-dT) - containing DNA polymers and the less pronounced interaction with the (dI-dC)-containing polymer shown by the melting and CD spectrral behaviour of the complexes are entirely reflected in the template inactivation. The same is evident for distamycin A. However, in contrast to netropsin the antibiotic distamycin A exhibits some binding tendency to poly (dG) - poly (dC). Binding effects of a netropsin derivative to DNA and (dA-dT) -containing polymers suggest the importance of hydrogen bonds of the peptide groups in the complex formation.

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Year:  1975        PMID: 1093141      PMCID: PMC342845          DOI: 10.1093/nar/2.3.391

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  9 in total

1.  Effect of Distamycin A on the template activity of DNA in a DNA polymerase system.

Authors:  B Puschendorf; H Grunicke
Journal:  FEBS Lett       Date:  1969-08       Impact factor: 4.124

2.  Preferential binding of E. coli RNA-polymerase to A-T rich sequences of bacteriophage lambda DNA.

Authors:  J Y. Le Talaer; P Jeanteur
Journal:  FEBS Lett       Date:  1971-01-30       Impact factor: 4.124

3.  Studies on the effect of distamycin A on the DNA dependent RNA polymerase system.

Authors:  B Puschendorf; E Petersen; H Wolf; H Werchau; H Grunicke
Journal:  Biochem Biophys Res Commun       Date:  1971-05-07       Impact factor: 3.575

4.  Distamycin: an inhibitor of DNA-dependent nucleic acid synthesis.

Authors:  W E Müller; J Obermeier; A Maidhof; R K Zahn
Journal:  Chem Biol Interact       Date:  1974-03       Impact factor: 5.192

5.  Binding of netropsin to DNA and synthetic polynucleotides.

Authors:  A S Zasedatelev; G V Gursky; C Zimmer; H Thrum
Journal:  Mol Biol Rep       Date:  1974-03       Impact factor: 2.316

6.  Influence of netropsin and distamycin A on the secondary structure and template activity of DNA.

Authors:  C Zimmer; B Puschendorf; H Grunicke; P Chandra; H Venner
Journal:  Eur J Biochem       Date:  1971-07-29

7.  Preferential binding of RNA polymerase to the thymidylic acid-rich fragments obtained from bacteriophage fl DNA.

Authors:  K Shishido; Y Ikeda
Journal:  J Biochem       Date:  1970-12       Impact factor: 3.387

8.  Purification and properties of deoxyribonucleic acid polymerase from Micrococcus lysodeikticus.

Authors:  B K Zimmerman
Journal:  J Biol Chem       Date:  1966-05-10       Impact factor: 5.157

9.  Conformation dependent binding of netropsin and distamycin to DNA and DNA model polymers.

Authors:  G Luck; H Triebel; M Waring; C Zimmer
Journal:  Nucleic Acids Res       Date:  1974-03       Impact factor: 16.971

  9 in total
  8 in total

1.  The molecular electrostatic potential and steric accessibility of poly (dI.dC). Comparison with poly (dG.dC).

Authors:  R Lavery; B Pullman
Journal:  Nucleic Acids Res       Date:  1981-12-21       Impact factor: 16.971

2.  The molecular origin of DNA-drug specificity in netropsin and distamycin.

Authors:  M L Kopka; C Yoon; D Goodsell; P Pjura; R E Dickerson
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

3.  Solution structure of a highly stable DNA duplex conjugated to a minor groove binder.

Authors:  S Kumar; M W Reed; H B Gamper; V V Gorn; E A Lukhtanov; M Foti; J West; R B Meyer; B I Schweitzer
Journal:  Nucleic Acids Res       Date:  1998-02-01       Impact factor: 16.971

4.  Duplex structure formation between oligo(dA)'s and oligo(dT)'s generated by thymine-specific interaction with netropsin.

Authors:  C Zimmer; G Luck; I Fric
Journal:  Nucleic Acids Res       Date:  1976-06       Impact factor: 16.971

5.  Protection of (dA.dT) cluster regions in the DNAase I cleavage of DNA by specific interaction with netropsin.

Authors:  C Zimmer; G Luck; R Nüske
Journal:  Nucleic Acids Res       Date:  1980-07-11       Impact factor: 16.971

6.  The molecular electrostatic potential and steric accessibility of poly (dA-dT). poly (dA-dT) in various conformations: B-DNA, D-DNA and 'alternating-B' DNA.

Authors:  R Lavery; B Pullman; S Corbin
Journal:  Nucleic Acids Res       Date:  1981-12-11       Impact factor: 16.971

7.  Specific interactions of distamycin A and its analogs with (A-T) rich and (G-C) rich duplex regions of DNA and deoxypolynucleotides.

Authors:  G Luck; C Zimmer; K E Reinert; F Arcamone
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

8.  The formation of A-DNA in NaDNA films is suppressed by netropsin.

Authors:  H Fritzsche; R Brandes; A Rupprecht; Z Song; T Weidlich; D R Kearns
Journal:  Nucleic Acids Res       Date:  1992-03-25       Impact factor: 16.971

  8 in total

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