Literature DB >> 10930750

The Giardia genome project database.

A G McArthur1, H G Morrison, J E Nixon, N Q Passamaneck, U Kim, G Hinkle, M K Crocker, M E Holder, R Farr, C I Reich, G E Olsen, S B Aley, R D Adam, F D Gillin, M L Sogin.   

Abstract

The Giardia genome project database provides an online resource for Giardia lamblia (WB strain, clone C6) genome sequence information. The database includes edited single-pass reads, the results of BLASTX searches, and details of progress towards sequencing the entire 12 million-bp Giardia genome. Pre-sorted BLASTX results can be retrieved based on keyword searches and BLAST searches of the high throughput Giardia data can be initiated from the web site or through NCBI. Descriptions of the genomic DNA libraries, project protocols and summary statistics are also available. Although the Giardia genome project is ongoing, new sequences are made available on a bi-monthly basis to ensure that researchers have access to information that may assist them in the search for genes and their biological function. The current URL of the Giardia genome project database is www.mbl.edu/Giardia.

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Year:  2000        PMID: 10930750     DOI: 10.1111/j.1574-6968.2000.tb09242.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  57 in total

1.  Three retrotransposon families in the genome of Giardia lamblia: two telomeric, one dead.

Authors:  I R Arkhipova; H G Morrison
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-04       Impact factor: 11.205

2.  Spliceosomal introns in a deep-branching eukaryote: the splice of life.

Authors:  Patricia J Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

Review 3.  How big is the iceberg of which organellar genes in nuclear genomes are but the tip?

Authors:  W F Doolittle; Y Boucher; C L Nesbø; C J Douady; J O Andersson; A J Roger
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2003-01-29       Impact factor: 6.237

4.  Evolutionary analyses of the small subunit of glutamate synthase: gene order conservation, gene fusions, and prokaryote-to-eukaryote lateral gene transfers.

Authors:  Jan O Andersson; Andrew J Roger
Journal:  Eukaryot Cell       Date:  2002-04

5.  Regulation of a Myb transcription factor by cyclin-dependent kinase 2 in Giardia lamblia.

Authors:  Chao-Cheng Cho; Li-Hsin Su; Yu-Chang Huang; Yu-Jiao Pan; Chin-Hung Sun
Journal:  J Biol Chem       Date:  2011-12-13       Impact factor: 5.157

Review 6.  Biology of Giardia lamblia.

Authors:  R D Adam
Journal:  Clin Microbiol Rev       Date:  2001-07       Impact factor: 26.132

7.  Evolution of eukaryotic transcription: insights from the genome of Giardia lamblia.

Authors:  Aaron A Best; Hilary G Morrison; Andrew G McArthur; Mitchell L Sogin; Gary J Olsen
Journal:  Genome Res       Date:  2004-08       Impact factor: 9.043

8.  A novel E2F-like protein involved in transcriptional activation of cyst wall protein genes in Giardia lamblia.

Authors:  Li-Hsin Su; Yu-Jiao Pan; Yu-Chang Huang; Chao-Cheng Cho; Chia-Wei Chen; Shao-Wei Huang; Sheng-Fung Chuang; Chin-Hung Sun
Journal:  J Biol Chem       Date:  2011-08-11       Impact factor: 5.157

9.  Methionine regeneration and aspartate aminotransferase in parasitic protozoa.

Authors:  L C Berger; J Wilson; P Wood; B J Berger
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

10.  Comparative analysis of the ribosomal components of the hydrogenosome-containing protist, Trichomonas vaginalis.

Authors:  Nobuko Arisue; Yasushi Maki; Hideji Yoshida; Akira Wada; Lidya B Sánchez; Miklós Müller; Tetsuo Hashimoto
Journal:  J Mol Evol       Date:  2004-07       Impact factor: 2.395

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