Literature DB >> 10924120

Oligomeric states of the HIV-1 integrase as measured by time-resolved fluorescence anisotropy.

E Deprez1, P Tauc, H Leh, J F Mouscadet, C Auclair, J C Brochon.   

Abstract

Self-assembly properties of HIV-1 integrase were investigated by time-resolved fluorescence anisotropy using tryptophanyl residues as a probe. From simulation analyses, we show that suitable photon counting leads to an accurate determination of long rotational correlation times in the range of 20-80 ns, permitting the distinction of the monomer, dimer, and tetramer from higher oligomeric forms of integrase. The accuracy of correlation times higher than 100 ns is too low to distinguish the octamer from other larger species. The oligomeric states of the widely used detergent-solubilized integrase were then studied in solution under varying parameters known to influence the activity. In the micromolar range, integrase exists as high-order multimers such as an octamer and/or aggregates and a well-defined tetramer, at 25 and 35 degrees C, respectively. However, integrase is monomeric at catalytically active concentrations (in the sub-micromolar range). Detergents (NP-40 and CHAPS) and divalent cation cofactors (Mg(2+) and Mn(2+)) have a clear dissociative effect on the high multimeric forms of integrase. In addition, we observed that Mg(2+) and Mn(2+) have different effects on both the oligomeric state and the conformation of the monomer. This could explain in part why these two metal cations are not equivalent in terms of catalytic activity in vitro. In contrast, addition of Zn(2+) stimulates dimerization. Interestingly, this role of Zn(2+) in the multimerization process was evident only in the presence of Mg(2+) which by itself does not induce oligomerization. Finally, it is highly suggested that the presence of detergent during the purification procedure plays a negative role in the proper self-assembly of integrase. Accordingly, the accompanying paper [Leh, H., et al. (2000) Biochemistry 39, 9285-9294] shows that a detergent-free integrase preparation has self-assembly and catalytic properties different from those of the detergent-solubilized enzyme.

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Year:  2000        PMID: 10924120     DOI: 10.1021/bi000397j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  55 in total

1.  HIV-1 integrase catalytic core: molecular dynamics and simulated fluorescence decays.

Authors:  C Laboulais; E Deprez; H Leh; J F Mouscadet; J C Brochon; M Le Bret
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

2.  Self-association and conformational properties of RAG1: implications for formation of the V(D)J recombinase.

Authors:  LeAnn J Godderz; Negar S Rahman; George M Risinger; Janeen L Arbuckle; Karla K Rodgers
Journal:  Nucleic Acids Res       Date:  2003-04-01       Impact factor: 16.971

3.  Inhibiting HIV-1 integrase by shifting its oligomerization equilibrium.

Authors:  Zvi Hayouka; Joseph Rosenbluh; Aviad Levin; Shoshana Loya; Mario Lebendiker; Dmitry Veprintsev; Moshe Kotler; Amnon Hizi; Abraham Loyter; Assaf Friedler
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-08       Impact factor: 11.205

4.  Catalytically-active complex of HIV-1 integrase with a viral DNA substrate binds anti-integrase drugs.

Authors:  Akram Alian; Sarah L Griner; Vicki Chiang; Manuel Tsiang; Gregg Jones; Gabriel Birkus; Romas Geleziunas; Andrew D Leavitt; Robert M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-04       Impact factor: 11.205

5.  Dynamic modulation of HIV-1 integrase structure and function by cellular lens epithelium-derived growth factor (LEDGF) protein.

Authors:  Christopher J McKee; Jacques J Kessl; Nikolozi Shkriabai; Mohd Jamal Dar; Alan Engelman; Mamuka Kvaratskhelia
Journal:  J Biol Chem       Date:  2008-09-18       Impact factor: 5.157

6.  Biochemical analysis of HIV-1 integrase variants resistant to strand transfer inhibitors.

Authors:  Ira B Dicker; Brian Terry; Zeyu Lin; Zhufang Li; Sagarika Bollini; Himadri K Samanta; Volodymyr Gali; Michael A Walker; Mark R Krystal
Journal:  J Biol Chem       Date:  2008-06-24       Impact factor: 5.157

7.  Differential multimerization of Moloney murine leukemia virus integrase purified under nondenaturing conditions.

Authors:  Rodrigo A Villanueva; Colleen B Jonsson; Jennifer Jones; Millie M Georgiadis; Monica J Roth
Journal:  Virology       Date:  2003-11-10       Impact factor: 3.616

8.  Model of full-length HIV-1 integrase complexed with viral DNA as template for anti-HIV drug design.

Authors:  Rajeshri G Karki; Yun Tang; Terrence R Burke; Marc C Nicklaus
Journal:  J Comput Aided Mol Des       Date:  2005-06-27       Impact factor: 3.686

9.  HIV-1 Integrase Binds the Viral RNA Genome and Is Essential during Virion Morphogenesis.

Authors:  Jacques J Kessl; Sebla B Kutluay; Dana Townsend; Stephanie Rebensburg; Alison Slaughter; Ross C Larue; Nikoloz Shkriabai; Nordine Bakouche; James R Fuchs; Paul D Bieniasz; Mamuka Kvaratskhelia
Journal:  Cell       Date:  2016-08-25       Impact factor: 41.582

10.  Structural properties of HIV integrase. Lens epithelium-derived growth factor oligomers.

Authors:  Kushol Gupta; Tracy Diamond; Young Hwang; Frederic Bushman; Gregory D Van Duyne
Journal:  J Biol Chem       Date:  2010-04-20       Impact factor: 5.157

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