Literature DB >> 10918371

The search for stable gas phase b(1) ions derived from aliphatic amino acids: a combined experimental and ab initio study.

R A O'Hair1, G E Reid.   

Abstract

Several previous studies have shown that b(1) ions (formally acylium ions, H(2)NCHRCO(+)) derived from protonated aliphatic amino acids are unstable in the gas phase, fragmenting via decarbonylation to form a(1) ions (iminium ions, H(2)N = CHR(+)). Herein we examine the fragmentation reactions of ten potential b(1) ion precursors to determine whether stable aliphatic b(1) ions can be formed in the gas phase. Of all the systems studied, only the aziridine b(1) ion and the dehydroalanine b(1) ion were found to be stable. These experimental results are entirely consistent with ab initio calculations (at the MP2(full)/6-311G** level) which indicate that while the loss of CO from the b(1) ion of glycine is barrierless and exoethermic, the related losses from the b(1) ions of aziridine and dehydroalanine have significant barriers (29.5 and 16.2 kcal mol(-1), respectively) and are endothermic overall. Copyright 2000 John Wiley & Sons, Ltd.

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Year:  2000        PMID: 10918371     DOI: 10.1002/1097-0231(20000730)14:14<1220::AID-RCM13>3.0.CO;2-3

Source DB:  PubMed          Journal:  Rapid Commun Mass Spectrom        ISSN: 0951-4198            Impact factor:   2.419


  6 in total

1.  Leaving group and gas phase neighboring group effects in the side chain losses from protonated serine and its derivatives.

Authors:  G E Reid; R J Simpson; R A O'Hair
Journal:  J Am Soc Mass Spectrom       Date:  2000-12       Impact factor: 3.109

2.  MALDI TOF/TOF tandem mass spectrometry as a new tool for amino acid analysis.

Authors:  Natalia V Gogichaeva; Todd Williams; Michail A Alterman
Journal:  J Am Soc Mass Spectrom       Date:  2006-10-30       Impact factor: 3.109

3.  Impact of Amidination on Peptide Fragmentation and Identification in Shotgun Proteomics.

Authors:  Sujun Li; Aditi Dabir; Santosh A Misal; Haixu Tang; Predrag Radivojac; James P Reilly
Journal:  J Proteome Res       Date:  2016-09-27       Impact factor: 4.466

4.  Can alpha- and beta-alanine containing peptides be distinguished based on the CID spectra of their protonated ions?

Authors:  Adrian K Y Lam; Sri H Ramarathinam; Anthony W Purcell; Richard A J O'Hair
Journal:  J Am Soc Mass Spectrom       Date:  2008-09-12       Impact factor: 3.109

5.  Fragmentation of protonated dipeptides containing arginine. Effect of activation method.

Authors:  Matthew W Forbes; Rebecca A Jockusch; Alex B Young; Alex G Harrison
Journal:  J Am Soc Mass Spectrom       Date:  2007-08-14       Impact factor: 3.109

6.  Cross-linking electrochemical mass spectrometry for probing protein three-dimensional structures.

Authors:  Qiuling Zheng; Hao Zhang; Lingying Tong; Shiyong Wu; Hao Chen
Journal:  Anal Chem       Date:  2014-09-04       Impact factor: 6.986

  6 in total

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