Literature DB >> 10908341

The role of trans-acting factors and DNA-bending in the silencing of human beta-globin gene expression.

L R Drew1, D C Tang, P E Berg, G P Rodgers.   

Abstract

The molecular mechanisms which govern the develop-mental specificity of human beta-globin gene transcription have been studied in K562 cells, a human eyrthroleukemia line that expresses minimal beta-globin. Protein-binding analysis reveals that the 5' region contains three elements bound by trans-acting factors, beta-protein 1 (BP1) and beta-protein 2 (BP2). In vitro mutagenesis of each individual element in a beta-globin vector containing chloramphenicol acetyl-transferase (pCAT) followed by transient transfection into K562 cells increased levels of CAT activity 5. 5-fold higher than wild-type (wt) betaCAT, consistent with their silencing role. Mutagenesis of all three elements, however, resulted in activity significantly lower than wt betaCAT. BP1 and BP2 motifs have overlapping binding sites for high mobility group proteins (HMG1+2), DNA-bending factors, shown here to extrinsically bend the beta-globin promoter. Theoretically, mutations in all beta-protein binding sites could affect the binding of HMG1+2 sufficiently to impede DNA-protein and/or protein-protein interactions needed to facilitate constitutive gene expression. Placing two turns of DNA between BP1 and BP2 motifs also increased expression 3-fold, indicative of spatial constraints required for optimal silencing. However, insertion of the HMG1+2 DNA-bending motif (also equivalent to two turns) facilitates beta-silencing by re-establishment of BP1-BP2 proximity. Thus a combination of general DNA-bending and specific transcriptional factors appear to be involved in beta-globin silencing in the embryonic/fetal erythroid stage.

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Year:  2000        PMID: 10908341      PMCID: PMC102669          DOI: 10.1093/nar/28.14.2823

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  46 in total

1.  Differences in DNA recognition and conformational change activity between boxes A and B in HMG2 protein.

Authors:  K i Yoshioka; K Saito; T Tanabe; A Yamamoto; Y Ando; Y Nakamura; H Shirakawa; M Yoshida
Journal:  Biochemistry       Date:  1999-01-12       Impact factor: 3.162

2.  Binding of HMG-I(Y) elicits structural changes in a silencer of the human beta-globin gene.

Authors:  M B Chase; S B Haga; W D Hankins; D M Williams; Z Bi; J W Strovel; C Obriecht; P E Berg
Journal:  Am J Hematol       Date:  1999-01       Impact factor: 10.047

3.  High mobility group protein 1 interacts specifically with the core domain of human TATA box-binding protein and interferes with transcription factor IIB within the pre-initiation complex.

Authors:  M Sutrias-Grau; M E Bianchi; J Bernués
Journal:  J Biol Chem       Date:  1999-01-15       Impact factor: 5.157

4.  The HMG domain protein SSRP1/PREIIBF is involved in activation of the human embryonic beta-like globin gene.

Authors:  M A Dyer; P J Hayes; M H Baron
Journal:  Mol Cell Biol       Date:  1998-05       Impact factor: 4.272

5.  DNA bending by the chromosomal protein HMG1 and its high mobility group box domains. Effect of flanking sequences.

Authors:  M Stros
Journal:  J Biol Chem       Date:  1998-04-24       Impact factor: 5.157

6.  The high mobility group protein 1 enhances binding of the estrogen receptor DNA binding domain to the estrogen response element.

Authors:  L E Romine; J R Wood; L A Lamia; P Prendergast; D P Edwards; A M Nardulli
Journal:  Mol Endocrinol       Date:  1998-05

Review 7.  HMGI family proteins: architectural transcription factors in mammalian development and cancer.

Authors:  X Zhou; K Chada
Journal:  Keio J Med       Date:  1998-06

8.  Chromatin components as part of a putative transcriptional repressing complex.

Authors:  N Lehming; A Le Saux; J Schüller; M Ptashne
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

9.  High-mobility group chromatin proteins 1 and 2 functionally interact with steroid hormone receptors to enhance their DNA binding in vitro and transcriptional activity in mammalian cells.

Authors:  V Boonyaratanakornkit; V Melvin; P Prendergast; M Altmann; L Ronfani; M E Bianchi; L Taraseviciene; S K Nordeen; E A Allegretto; D P Edwards
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

Review 10.  Transcriptional factors for specific globin genes.

Authors:  J J Bieker; L Ouyang; X Chen
Journal:  Ann N Y Acad Sci       Date:  1998-06-30       Impact factor: 5.691

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  4 in total

1.  Transcriptional silencing of {gamma}-globin by BCL11A involves long-range interactions and cooperation with SOX6.

Authors:  Jian Xu; Vijay G Sankaran; Min Ni; Tobias F Menne; Rishi V Puram; Woojin Kim; Stuart H Orkin
Journal:  Genes Dev       Date:  2010-04-15       Impact factor: 11.361

2.  BP1, a homeodomain-containing isoform of DLX4, represses the beta-globin gene.

Authors:  Michael B Chase; Sidong Fu; Susanne B Haga; Gregory Davenport; Holly Stevenson; Khanh Do; Doris Morgan; Alex L Mah; Patricia E Berg
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

3.  BP1 motif in the human beta-globin promoter affects beta-globin expression during embryonic/fetal erythropoiesis in transgenic mice bearing the human beta-globin gene.

Authors:  Olga P Zoueva; Lisa J Garrett; David Bodine; Griffin P Rodgers
Journal:  Blood Cells Mol Dis       Date:  2008-07-25       Impact factor: 3.039

4.  Sox6 directly silences epsilon globin expression in definitive erythropoiesis.

Authors:  Zanhua Yi; Orit Cohen-Barak; Nobuko Hagiwara; Paul D Kingsley; Deborah A Fuchs; Drew T Erickson; Elliot M Epner; James Palis; Murray H Brilliant
Journal:  PLoS Genet       Date:  2006-02-03       Impact factor: 5.917

  4 in total

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