Literature DB >> 10907743

Obtaining ligand geometries from paramagnetic shifts in low-spin haem proteins.

D L Turner1.   

Abstract

Previously, the theoretical relationship between paramagnetic chemical shifts and the axial ligands in low-spin haem proteins has been tested extensively in haems b and c with His, Met, and cyanide ligands. Variations in the electronic structure of the haem and the magnetic susceptibility tensors have been shown to depend primarily on the axial ligand geometry, and the shifts of haem substituents have been used to obtain the first structural information for several cytochromes. Recently, the database of assigned spectra for bis-His haems has been extended sufficiently for an empirical equation to be produced for treating 1H NMR data from haem methyl groups at 298 K. However, the database used contains large systematic deviations and the form of the equation leads to systematic errors in the ligand geometries. This article describes the link with the semi-empirical methods used previously and provides a set of corrected empirical parameters as well as an improved equation. The possibilities for generalising the empirical method to account for ligands other than His and temperatures other than 298 K are discussed.

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Year:  2000        PMID: 10907743     DOI: 10.1007/pl00010661

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  19 in total

1.  Cytochrome c'' isolated from Methylophilus methylotrophus. An example of bis-histidine-co-ordinated Fe3+ haem, with near-perpendicular orientation of the ligands.

Authors:  M J Berry; S J George; A J Thomson; H Santos; D L Turner
Journal:  Biochem J       Date:  1990-09-01       Impact factor: 3.857

2.  Use of paramagnetic NMR probes for structural analysis in cytochrome c3 from Desulfovibrio vulgaris.

Authors:  C A Salgueiro; D L Turner; A V Xavier
Journal:  Eur J Biochem       Date:  1997-03-15

3.  Evaluation of dipolar nuclear magnetic resonance shifts in low-spin hemin systems: ferricytochrome c and metmyoglobin cyanide.

Authors:  W D Horrocks; E S Greenberg
Journal:  Biochim Biophys Acta       Date:  1973-09-21

4.  Electronic structure of cyanide complexes of hemes and heme proteins.

Authors:  R G Shulman; S H Glarum; M Karplus
Journal:  J Mol Biol       Date:  1971-04-14       Impact factor: 5.469

5.  Carbon-13 NMR studies of the influence of axial ligand orientation on haem electronic structure.

Authors:  D L Turner; C A Salgueiro; P Schenkels; J LeGall; A V Xavier
Journal:  Biochim Biophys Acta       Date:  1995-01-05

6.  Heme methyl 1H chemical shifts as structural parameters in some low-spin ferriheme proteins.

Authors:  I Bertini; C Luchinat; G Parigi; F A Walker
Journal:  J Biol Inorg Chem       Date:  1999-08       Impact factor: 3.358

7.  Crystal structure of cytochrome c3 from Desulfovibrio desulfuricans Norway at 1.7 A resolution.

Authors:  M Czjzek; F Payan; F Guerlesquin; M Bruschi; R Haser
Journal:  J Mol Biol       Date:  1994-11-04       Impact factor: 5.469

8.  Cytochrome c-551.5 (c7) from Desulfuromonas acetoxidans.

Authors:  I Probst; M Bruschi; N Pfennig; J Le Gall
Journal:  Biochim Biophys Acta       Date:  1977-04-11

9.  Paramagnetic NMR shifts in cyanoferricytochrome c. Investigation of thermal stability and deviations from Curie law behaviour.

Authors:  L Brennan; D L Turner
Journal:  Biochim Biophys Acta       Date:  1997-09-26

10.  Evaluation of 13C and 1H Fermi contact shifts in horse cytochrome c. The origin of the anti-Curie effect.

Authors:  D L Turner
Journal:  Eur J Biochem       Date:  1993-02-01
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  3 in total

1.  1H-NMR study of the effect of temperature through reversible unfolding on the heme pocket molecular structure and magnetic properties of aplysia limacina cyano-metmyoglobin.

Authors:  Zhicheng Xia; Bao D Nguyen; Maurizio Brunori; Francesca Cutruzzolà; Gerd N La Mar
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

2.  Dimethyl propionate ester heme-containing cytochrome b5: structure and stability.

Authors:  L Banci; I Bertini; B R Branchini; P Hajieva; G A Spyroulias; P Turano
Journal:  J Biol Inorg Chem       Date:  2001-06       Impact factor: 3.358

3.  Characterization of the heme-histidine cross-link in cyanobacterial hemoglobins from Synechocystis sp. PCC 6803 and Synechococcus sp. PCC 7002.

Authors:  B Christie Vu; David A Vuletich; Syna A Kuriakose; Christopher J Falzone; Juliette T J Lecomte
Journal:  J Biol Inorg Chem       Date:  2004-01-15       Impact factor: 3.358

  3 in total

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