Literature DB >> 10900384

The cell in absence of aggregation artifacts.

J Dubochet1, N Sartori Blanc.   

Abstract

Eduard Kellenberger understood that the conventional resin-embedding, he helped to develop (Ryter, A., Kellenberger, E., 1958. L'inclusion au polyester pour l'ultramicrotomie. J. Ultrastruct. Res. , 2, 200-214), was prone to aggregation artifacts (Kellenberger, E., 1987. The response to biological macromolecules and supramolecular structures to the physics of specimen cryo-preparation. In: Steinbrecht, R.A., Zierold, K. (Eds.), Cryo-techniques in Biological Electron Microscopy, Springer, Berlin, pp. 35-63). He was instrumental in developing various methods to overcome this limitation, for instance, by using low temperature-embedding and partially hydrophilic resins (Carlemalm, E., Garavito, R.M., Villiger, W., 1982. Resin development for electron microscopy and an analysis of embedding at low temperature. J. Microstruct., 126, 123-143; Villiger,W., 1993. Low temperature-embedding with Lowicryl resins. In: Robards, A.W., Wilson, A.J. (Eds.), Procedures in electron microscopy, Wiley, Chichester, UK, pp. 16:7.3-16:7.6). In principle, cryo-electron microscopy of vitreous sections is free of any aggregation artifact since the material remains fully hydrated and is free of chemical fixation or staining. The method is technically difficult still, but recent progress has made it amenable to routine practical applications. We compare here electron microscopical aspects of Zea mays meristem cells prepared by: (1) conventional resin-embedding and sectioning; (2) low temperature-embedding and sectioning of freeze substituted samples; and (3) cryo-sections of vitrified samples. The appearance of the extra-cellular space, the cytoplasm and the nucleoplasm are very different in conditions (1) and (3). They appear as compact, irregular and well delineated structures in conventional resin sections, whereas they are more diffuse and homogeneous in the vitreous sections. In the resin sections, the material seems to form a complex matrix, whereas it looks more like a thick soup in the vitreous sample. Low temperature-embedding (condition 2) shows an intermediate appearance. We suggest that regardless of the difference due to staining and different sectioning conditions, the other image differences are the consequence of aggregation artifacts in the resin-embedded specimens.

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Year:  2001        PMID: 10900384     DOI: 10.1016/s0968-4328(00)00026-3

Source DB:  PubMed          Journal:  Micron        ISSN: 0968-4328            Impact factor:   2.251


  32 in total

1.  Electron tomography of frozen-hydrated isolated triad junctions.

Authors:  T Wagenknecht; C-E Hsieh; B K Rath; S Fleischer; M Marko
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

2.  Cryo-transmission electron microscopy of frozen-hydrated sections of Escherichia coli and Pseudomonas aeruginosa.

Authors:  Valério R F Matias; Ashraf Al-Amoudi; Jacques Dubochet; Terry J Beveridge
Journal:  J Bacteriol       Date:  2003-10       Impact factor: 3.490

Review 3.  Cryo-electron microscopy of vitreous sections.

Authors:  Ashraf Al-Amoudi; Jiin-Ju Chang; Amélie Leforestier; Alasdair McDowall; Laurée Michel Salamin; Lars P O Norlén; Karsten Richter; Nathalie Sartori Blanc; Daniel Studer; Jacques Dubochet
Journal:  EMBO J       Date:  2004-08-19       Impact factor: 11.598

4.  3D structure of eukaryotic flagella in a quiescent state revealed by cryo-electron tomography.

Authors:  Daniela Nicastro; J Richard McIntosh; Wolfgang Baumeister
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-24       Impact factor: 11.205

5.  The mammalian central nervous synaptic cleft contains a high density of periodically organized complexes.

Authors:  Benoît Zuber; Irina Nikonenko; Paul Klauser; Dominique Muller; Jacques Dubochet
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-14       Impact factor: 11.205

Review 6.  3D electron microscopy of biological nanomachines: principles and applications.

Authors:  C O S Sorzano; S Jonic; M Cottevieille; E Larquet; N Boisset; S Marco
Journal:  Eur Biophys J       Date:  2007-07-05       Impact factor: 1.733

7.  Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ.

Authors:  Mikhail Eltsov; Kirsty M Maclellan; Kazuhiro Maeshima; Achilleas S Frangakis; Jacques Dubochet
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-08       Impact factor: 11.205

8.  Direct visualization of the outer membrane of mycobacteria and corynebacteria in their native state.

Authors:  Benoît Zuber; Mohamed Chami; Christine Houssin; Jacques Dubochet; Gareth Griffiths; Mamadou Daffé
Journal:  J Bacteriol       Date:  2008-06-20       Impact factor: 3.490

9.  Fine structure of the "PcG body" in human U-2 OS cells established by correlative light-electron microscopy.

Authors:  Jana Smigová; Pavel Juda; Dušan Cmarko; Ivan Raška
Journal:  Nucleus       Date:  2011 May-Jun       Impact factor: 4.197

10.  Quantitative analysis of the native presynaptic cytomatrix by cryoelectron tomography.

Authors:  Rubén Fernández-Busnadiego; Benoît Zuber; Ulrike Elisabeth Maurer; Marek Cyrklaff; Wolfgang Baumeister; Vladan Lucic
Journal:  J Cell Biol       Date:  2010-01-11       Impact factor: 10.539

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