Literature DB >> 10899139

Minisatellites: mutability and genome architecture.

G Vergnaud1, F Denoeud.   

Abstract

Minisatellites have been found in association with important features of human genome biology such as gene regulation, chromosomal fragile sites, and imprinting. Our knowledge of minisatellite biology has greatly increased in the past 10 years owing to the identification and careful analysis of human hypermutable minisatellites, experimental models in yeast, and recent in vitro studies of minisatellite recombination properties. In parallel, minisatellites have been put forward as potential biomarkers for the monitoring of genotoxic agents such as ionizing radiation. We summarize and discuss recent observations on minisatellites. In addition we take advantage of recent whole chromosome sequence data releases to provide a unifying view which may facilitate the annotation of tandem repeat sequences.

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Year:  2000        PMID: 10899139     DOI: 10.1101/gr.10.7.899

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


  69 in total

1.  Minisatellite alterations in ZRT1 mutants occur via RAD52-dependent and RAD52-independent mechanisms in quiescent stationary phase yeast cells.

Authors:  Maire K Kelly; Bonnie Alver; David T Kirkpatrick
Journal:  DNA Repair (Amst)       Date:  2011-04-22

2.  A pilot study examining germline minisatellite mutations in the offspring of Danish childhood and adolescent cancer survivors treated with radiotherapy.

Authors:  Gwen S Rees; Michael Z Trikic; Jeanette F Winther; E Janet Tawn; Marilyn Stovall; Jørgen H Olsen; Catherine Rechnitzer; Henrik Schrøder; Per Guldberg; John D Boice
Journal:  Int J Radiat Biol       Date:  2006-03       Impact factor: 2.694

3.  Predicting human minisatellite polymorphism.

Authors:  France Denoeud; Gilles Vergnaud; Gary Benson
Journal:  Genome Res       Date:  2003-04-14       Impact factor: 9.043

4.  Identification and characterization of polymorphic minisatellites in the phytopathogenic ascomycete Leptosphaeria maculans.

Authors:  Maria Eckert; Lilian Gout; Thierry Rouxel; Françoise Blaise; Malgorzata Jedryczka; Bruce Fitt; Marie-Hélène Balesdent
Journal:  Curr Genet       Date:  2004-11-20       Impact factor: 3.886

5.  Characterization of a tandem repeat polymorphism in Legionella pneumophila and its use for genotyping.

Authors:  C Pourcel; Y Vidgop; F Ramisse; G Vergnaud; C Tram
Journal:  J Clin Microbiol       Date:  2003-05       Impact factor: 5.948

6.  Mathematical modelling of Mycobacterium tuberculosis VNTR loci estimates a very slow mutation rate for the repeats.

Authors:  Andrew Grant; Catherine Arnold; Nicola Thorne; Saheer Gharbia; Anthony Underwood
Journal:  J Mol Evol       Date:  2008-05-06       Impact factor: 2.395

Review 7.  Flap endonuclease 1.

Authors:  Lata Balakrishnan; Robert A Bambara
Journal:  Annu Rev Biochem       Date:  2013-02-28       Impact factor: 23.643

8.  New molecular mechanism for Ullrich congenital muscular dystrophy: a heterozygous in-frame deletion in the COL6A1 gene causes a severe phenotype.

Authors:  Te-Cheng Pan; Rui-Zhu Zhang; Dominick G Sudano; Suely K Marie; Carsten G Bönnemann; Mon-Li Chu
Journal:  Am J Hum Genet       Date:  2003-07-01       Impact factor: 11.025

9.  Paternal lifestyle as a potential source of germline mutations transmitted to offspring.

Authors:  Joost O Linschooten; Nicole Verhofstad; Kristine Gutzkow; Ann-Karin Olsen; Carole Yauk; Yvonne Oligschläger; Gunnar Brunborg; Frederik J van Schooten; Roger W L Godschalk
Journal:  FASEB J       Date:  2013-03-28       Impact factor: 5.191

10.  Elevated minisatellite mutation rate in the post-chernobyl families from ukraine.

Authors:  Yuri E Dubrova; Gemma Grant; Anatoliy A Chumak; Vasyl A Stezhka; Angela N Karakasian
Journal:  Am J Hum Genet       Date:  2002-09-11       Impact factor: 11.025

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