Literature DB >> 10891146

Double-helical cyclic peptides: design, synthesis, and crystal structure of figure-eight mirror-image conformers of adamantane-constrained cystine-containing cyclic peptide cyclo (Adm-Cyst)(3).

D Ranganathan1, V Haridas, R Nagaraj, I L Karle.   

Abstract

A large number of macrocycles containing alternating repeats of cystine diOMe(-NH-CH(CO(2)Me)-CH(2)-S-)(2) and either a conformationally rigid aromatic/alicyclic moiety or a flexible polymethylene unit (X) in the cyclic backbone with ring size varying from 13- to 78-membered have been examined by spectral ((1)H NMR, FT-IR, CD) and X-ray crystallography studies for unusual conformational preferences. While (1)H NMR measurements indicated a turnlike conformation for all macrocycles, stabilized by intramolecular NH.CO hydrogen bonding, as also supported by FT-IR spectra in chloroform, convincing proof for beta-turn structures was provided by circular dichroism studies. Single-crystal X-ray studies on 39-membered cyclo (Adm-L-Cyst)(3) revealed a double-helical fold (figure-eight motif) for the macrocycle. Only a right-handed double helix was seen in the macrocycle constructed from L-cystine. The mirror-image macrocycle made up of D-cystine units exhibited a double helix with exactly the opposite screw sense, as expected. The enantiomeric figure-eights were stabilized by two intramolecular NH. CO hydrogen bonds and exhibited identical (1) H NMR and FT-IR spectra. The CD spectra of both isomers had a mirror-image relationship. The present results have clearly brought out the importance of cystine residues in inducing turn conformation that may be an important deciding factor for the adoption of topologically important structures by macrocycles containing multiple S-S linkages.

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Year:  2000        PMID: 10891146     DOI: 10.1021/jo0003807

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  3 in total

1.  Super-secondary structure peptidomimetics: design and synthesis of an α-α hairpin analogue.

Authors:  Laura Nevola; Johanna M Rodriguez; Sam Thompson; Andrew D Hamilton
Journal:  Supramol Chem       Date:  2013-09-01       Impact factor: 1.688

2.  Diphenic acid as a general conformational lock in the design of bihelical structures.

Authors:  Isabella L Karle; Punna Venkateshwarlu; Ramakrishnan Nagaraj; Akella V S Sarma; Dolly Vijay; Narahari G Sastry; Subramania Ranganathan
Journal:  Chemistry       Date:  2007       Impact factor: 5.236

3.  Detection of highly curved membrane surfaces using a cyclic peptide derived from synaptotagmin-I.

Authors:  Jonel P Saludes; Leslie A Morton; Nilanjan Ghosh; Lida A Beninson; Edwin R Chapman; Monika Fleshner; Hang Yin
Journal:  ACS Chem Biol       Date:  2012-07-17       Impact factor: 5.100

  3 in total

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