Literature DB >> 10891088

A cis-proline to alanine mutant of E. coli aspartate transcarbamoylase: kinetic studies and three-dimensional crystal structures.

L Jin1, B Stec, E R Kantrowitz.   

Abstract

The only cis-proline residue in Escherichia coli aspartate transcarbamoylase has been replaced by alanine using site-specific mutagenesis. The Pro268-->Ala enzyme exhibits a 40-fold reduction in enzyme activity and decreased substrate affinity toward carbamoyl phosphate and aspartate compared to the corresponding values for the wild-type enzyme. The concentration of the bisubstrate analogue N-phosphonacetyl-L-aspartate (PALA) required to activate the mutant enzyme to the same extent as the wild-type enzyme is significantly increased. The heterotropic effects of ATP and CTP upon the Pro268-->Ala enzyme are also altered. Crystal structures of the Pro268-->Ala enzyme in both T- and R-states show that the cis-peptidyl linkage between Leu267 and Ala268 is maintained. However, the tertiary structure of both the catalytic and regulatory chains has been altered by the amino acid substitution, and the mobility of the active-site residues is increased for the R-state structure of Pro268-->Ala enzyme as comparison with the wild-type R-state structure. These structural changes are responsible for the loss of enzyme activity. Thus, Pro268 is required for the proper positioning of catalytically critical residues in the active site and is important for the formation of the high-activity high-affinity R-state of E. coli aspartate transcarbamoylase.

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Year:  2000        PMID: 10891088     DOI: 10.1021/bi000418+

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

1.  Structural basis for ordered substrate binding and cooperativity in aspartate transcarbamoylase.

Authors:  Jie Wang; Kimberly A Stieglitz; James P Cardia; Evan R Kantrowitz
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2.  Direct observation in solution of a preexisting structural equilibrium for a mutant of the allosteric aspartate transcarbamoylase.

Authors:  Luc Fetler; Evan R Kantrowitz; Patrice Vachette
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-03       Impact factor: 11.205

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Authors:  Michal Brylinski; Wei P Feinstein
Journal:  J Comput Aided Mol Des       Date:  2013-07-10       Impact factor: 3.686

4.  The crystal structure of the cis-proline to glycine variant (P114G) of ribonuclease A.

Authors:  David A Schultz; Alan M Friedman; Mark A White; Robert O Fox
Journal:  Protein Sci       Date:  2005-09-30       Impact factor: 6.725

5.  Characterization of secondary amide peptide bond isomerization: thermodynamics and kinetics from 2D NMR spectroscopy.

Authors:  Jin Zhang; Markus W Germann
Journal:  Biopolymers       Date:  2011-05-02       Impact factor: 2.505

6.  The conserved cis-Pro39 residue plays a crucial role in the proper positioning of the catalytic base Asp38 in ketosteroid isomerase from Comamonas testosteroni.

Authors:  Gyu Hyun Nam; Sun-Shin Cha; Young Sung Yun; Yun Hee Oh; Bee Hak Hong; Heung-Soo Lee; Kwan Yong Choi
Journal:  Biochem J       Date:  2003-10-15       Impact factor: 3.857

7.  The first high pH structure of Escherichia coli aspartate transcarbamoylase.

Authors:  Kimberly A Stieglitz; Jiarong Xia; Evan R Kantrowitz
Journal:  Proteins       Date:  2009-02-01

Review 8.  From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases.

Authors:  Dashuang Shi; Norma M Allewell; Mendel Tuchman
Journal:  Int J Mol Sci       Date:  2015-08-12       Impact factor: 5.923

  8 in total

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