Literature DB >> 10884915

x ray crystallography.

M S Smyth1, J H Martin.   

Abstract

x Ray crystallography is currently the most favoured technique for structure determination of proteins and biological macromolecules. Increasingly, those interested in all branches of the biological sciences require structural information to shed light on previously unanswered questions. Furthermore, the availability of a protein structure can provide a more detailed focus for future research. The extension of the technique to systems such as viruses, immune complexes, and protein-nucleic acid complexes serves only to widen the appeal of crystallography. Structure based drug design, site directed mutagenesis, elucidation of enzyme mechanisms, and specificity of protein-ligand interactions are just a few of the areas in which x ray crystallography has provided clarification.

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Substances:

Year:  2000        PMID: 10884915      PMCID: PMC1186895          DOI: 10.1136/mp.53.1.8

Source DB:  PubMed          Journal:  Mol Pathol        ISSN: 1366-8714


  18 in total

1.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

2.  Improved methods for building protein models in electron density maps and the location of errors in these models.

Authors:  T A Jones; J Y Zou; S W Cowan; M Kjeldgaard
Journal:  Acta Crystallogr A       Date:  1991-03-01       Impact factor: 2.290

3.  Crystallographic R factor refinement by molecular dynamics.

Authors:  A T Brünger; J Kuriyan; M Karplus
Journal:  Science       Date:  1987-01-23       Impact factor: 47.728

Review 4.  The molecular replacement method.

Authors:  M G Rossmann
Journal:  Acta Crystallogr A       Date:  1990-02-01       Impact factor: 2.290

Review 5.  Crystallography of biological macromolecules at ultra-low temperature.

Authors:  H Hope
Journal:  Annu Rev Biophys Biophys Chem       Date:  1990

6.  Processing of X-ray diffraction data collected in oscillation mode.

Authors:  Z Otwinowski; W Minor
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

7.  [21] Data collection strategy.

Authors:  Z Dauter
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

8.  [25] Overview of isomorphous replacement phasing.

Authors:  Hengming Ke
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

9.  [33] AMoRe: An automated molecular replacement program package.

Authors:  Jorge Navaza; Pedro Saludjian
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

10.  A novel dialysis procedure for the crystallization of proteins.

Authors:  D H Thomas; A Rob; D W Rice
Journal:  Protein Eng       Date:  1989-03
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  15 in total

Review 1.  Recent Trends in System-Scale Integrative Approaches for Discovering Protective Antigens Against Mycobacterial Pathogens.

Authors:  Aarti Rana; Shweta Thakur; Girish Kumar; Yusuf Akhter
Journal:  Front Genet       Date:  2018-11-27       Impact factor: 4.599

2.  Chemically functionalized conical PET nanopore for protein detection at the single-molecule level.

Authors:  Youwen Zhang; Xiaohan Chen; Ceming Wang; Golbarg M Roozbahani; Hsueh-Chia Chang; Xiyun Guan
Journal:  Biosens Bioelectron       Date:  2020-05-16       Impact factor: 10.618

3.  Opportunities and Limitations for Assigning Relative Configurations of Antibacterial Bislactones using GIAO NMR Shift Calculations.

Authors:  Sonja L Knowles; Christopher D Roberts; Mario Augustinović; Laura Flores-Bocanegra; Huzefa A Raja; Kimberly N Heath-Borrero; Joanna E Burdette; Joseph O Falkinham Iii; Cedric J Pearce; Nicholas H Oberlies
Journal:  J Nat Prod       Date:  2021-03-25       Impact factor: 4.050

4.  Adaptive local learning in sampling based motion planning for protein folding.

Authors:  Chinwe Ekenna; Shawna Thomas; Nancy M Amato
Journal:  BMC Syst Biol       Date:  2016-08-01

5.  Molecular Docking and 3D-Pharmacophore Modeling to Study the Interactions of Chalcone Derivatives with Estrogen Receptor Alpha.

Authors:  Muchtaridi Muchtaridi; Hasna Nur Syahidah; Anas Subarnas; Muhammad Yusuf; Sharon D Bryant; Thierry Langer
Journal:  Pharmaceuticals (Basel)       Date:  2017-10-16

6.  Iterative screen optimization maximizes the efficiency of macromolecular crystallization.

Authors:  Harrison G Jones; Daniel Wrapp; Morgan S A Gilman; Michael B Battles; Nianshuang Wang; Sofia Sacerdote; Gwo Yu Chuang; Peter D Kwong; Jason S McLellan
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2019-01-24       Impact factor: 1.056

7.  Predicting protein aggregation during storage in lyophilized solids using solid state amide hydrogen/deuterium exchange with mass spectrometric analysis (ssHDX-MS).

Authors:  Balakrishnan S Moorthy; Steven G Schultz; Sherry G Kim; Elizabeth M Topp
Journal:  Mol Pharm       Date:  2014-05-21       Impact factor: 4.939

Review 8.  Computational Nanoscopy of Tight Junctions at the Blood-Brain Barrier Interface.

Authors:  Nandhini Rajagopal; Flaviyan Jerome Irudayanathan; Shikha Nangia
Journal:  Int J Mol Sci       Date:  2019-11-08       Impact factor: 5.923

9.  In Situ Proteolysis Condition-Induced Crystallization of the XcpVWX Complex in Different Lattices.

Authors:  Yichen Zhang; Shu Wang; Zongchao Jia
Journal:  Int J Mol Sci       Date:  2020-01-02       Impact factor: 5.923

10.  A new soaking procedure for X-ray crystallographic structural determination of protein-peptide complexes.

Authors:  Alice Ballone; Roxanne A Lau; Fabian P A Zweipfenning; Christian Ottmann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-09-15       Impact factor: 1.056

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