Literature DB >> 10878248

Regulating the cellular economy of supply and demand.

J S Hofmeyr1, A Cornish-Bowden.   

Abstract

Cellular metabolism is a molecular economy that is functionally organised into supply and demand blocks linked by metabolic products and cofactor cycles. Supply-demand analysis allows the behaviour, control and regulation of metabolism as a whole to be understood quantitatively in terms of the elasticities of supply and demand, which are experimentally measurable properties of the individual blocks. The kinetic and thermodynamic aspects of regulation are clearly distinguished. One important result is the demonstration that when flux is controlled by one block, the other block determines to which degree the concentration of the linking metabolite is homeostatically maintained.

Mesh:

Year:  2000        PMID: 10878248     DOI: 10.1016/s0014-5793(00)01668-9

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  55 in total

1.  Protein phosphorylation can regulate metabolite concentrations rather than control flux: the example of glycogen synthase.

Authors:  James R A Schafer; David A Fell; Douglas Rothman; Robert G Shulman
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-26       Impact factor: 11.205

2.  Expression of genes encoding F(1)-ATPase results in uncoupling of glycolysis from biomass production in Lactococcus lactis.

Authors:  Brian J Koebmann; Christian Solem; Martin B Pedersen; Dan Nilsson; Peter R Jensen
Journal:  Appl Environ Microbiol       Date:  2002-09       Impact factor: 4.792

3.  Network analysis of enzyme activities and metabolite levels and their relationship to biomass in a large panel of Arabidopsis accessions.

Authors:  Ronan Sulpice; Sandra Trenkamp; Matthias Steinfath; Bjorn Usadel; Yves Gibon; Hanna Witucka-Wall; Eva-Theresa Pyl; Hendrik Tschoep; Marie Caroline Steinhauser; Manuela Guenther; Melanie Hoehne; Johann M Rohwer; Thomas Altmann; Alisdair R Fernie; Mark Stitt
Journal:  Plant Cell       Date:  2010-08-10       Impact factor: 11.277

4.  Homeostasis and the glycogen shunt explains aerobic ethanol production in yeast.

Authors:  Robert G Shulman; Douglas L Rothman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-17       Impact factor: 11.205

5.  Is the regulation of galactose 1-phosphate tuned against gene expression noise?

Authors:  Pedro de Atauri; David Orrell; Stephen Ramsey; Hamid Bolouri
Journal:  Biochem J       Date:  2005-04-01       Impact factor: 3.857

6.  Experimental supply-demand analysis of anaerobic yeast energy metabolism.

Authors:  O Kroukamp; J M Rohwer; J H S Hofmeyr; J L Snoep
Journal:  Mol Biol Rep       Date:  2002       Impact factor: 2.316

Review 7.  The micro-architecture of the cerebral cortex: functional neuroimaging models and metabolism.

Authors:  Jorge J Riera; Arne Schousboe; Helle S Waagepetersen; Clare Howarth; Fahmeed Hyder
Journal:  Neuroimage       Date:  2008-01-11       Impact factor: 6.556

8.  Branch-point stoichiometry can generate weak links in metabolism: the case of glycine biosynthesis.

Authors:  Enrique Melendez-Hevia; Patricia De Paz-Lugo
Journal:  J Biosci       Date:  2008-12       Impact factor: 1.826

Review 9.  Memory Takes Time.

Authors:  Nikolay Vadimovich Kukushkin; Thomas James Carew
Journal:  Neuron       Date:  2017-07-19       Impact factor: 17.173

10.  Genome-Scale Architecture of Small Molecule Regulatory Networks and the Fundamental Trade-Off between Regulation and Enzymatic Activity.

Authors:  Ed Reznik; Dimitris Christodoulou; Joshua E Goldford; Emma Briars; Uwe Sauer; Daniel Segrè; Elad Noor
Journal:  Cell Rep       Date:  2017-09-12       Impact factor: 9.423

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