Literature DB >> 10875700

Parametric estimate of intensity inhomogeneities applied to MRI.

M Styner1, C Brechbühler, G Székely, G Gerig.   

Abstract

This paper presents a new approach to the correction of intensity inhomogeneities in magnetic resonance imaging (MRI) that significantly improves intensity-based tissue segmentation. The distortion of the image brightness values by a low-frequency bias field impedes visual inspection and segmentation. The new correction method called parametric bias field correction (PABIC) is based on a simplified model of the imaging process, a parametric model of tissue class statistics, and a polynomial model of the inhomogeneity field. We assume that the image is composed of pixels assigned to a small number of categories with a priori known statistics. Further we assume that the image is corrupted by noise and a low-frequency inhomogeneity field. The estimation of the parametric bias field is formulated as a nonlinear energy minimization problem using an evolution strategy (ES). The resulting bias field is independent of the image region configurations and thus overcomes limitations of methods based on homomorphic filtering. Furthermore, PABIC can correct bias distortions much larger than the image contrast. Input parameters are the intensity statistics of the classes and the degree of the polynomial function. The polynomial approach combines bias correction with histogram adjustment, making it well suited for normalizing the intensity histogram of datasets from serial studies. We present simulations and a quantitative validation with phantom and test images. A large number of MR image data acquired with breast, surface, and head coils, both in two dimensions and three dimensions, have been processed and demonstrate the versatility and robustness of this new bias correction scheme.

Mesh:

Year:  2000        PMID: 10875700     DOI: 10.1109/42.845174

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  83 in total

1.  Accurate template-based correction of brain MRI intensity distortion with application to dementia and aging.

Authors:  C Studholme; V Cardenas; E Song; F Ezekiel; A Maudsley; M Weiner
Journal:  IEEE Trans Med Imaging       Date:  2004-01       Impact factor: 10.048

2.  Improvement in variability of the horizontal meridian of the primary visual area following high-resolution spatial normalization.

Authors:  P Kochunov; M Hasnain; J Lancaster; T Grabowski; P Fox
Journal:  Hum Brain Mapp       Date:  2003-02       Impact factor: 5.038

3.  Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation.

Authors:  Simon K Warfield; Kelly H Zou; William M Wells
Journal:  IEEE Trans Med Imaging       Date:  2004-07       Impact factor: 10.048

4.  Automatic correction of intensity nonuniformity from sparseness of gradient distribution in medical images.

Authors:  Yuanjie Zheng; Murray Grossman; Suyash P Awate; James C Gee
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

5.  Age-related morphology trends of cortical sulci.

Authors:  Peter Kochunov; Jean-François Mangin; Thomas Coyle; Jack Lancaster; Paul Thompson; Dennis Rivière; Yann Cointepas; Jean Régis; Anita Schlosser; Don R Royall; Karl Zilles; John Mazziotta; Arthur Toga; Peter T Fox
Journal:  Hum Brain Mapp       Date:  2005-11       Impact factor: 5.038

6.  Restoration of MRI Data for Field Nonuniformities using High Order Neighborhood Statistics.

Authors:  Stathis Hadjidemetriou; Colin Studholme; Susanne Mueller; Michael Weiner; Norbert Schuff
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2007-03-05

7.  Automated mapping of hippocampal atrophy in 1-year repeat MRI data from 490 subjects with Alzheimer's disease, mild cognitive impairment, and elderly controls.

Authors:  Jonathan H Morra; Zhuowen Tu; Liana G Apostolova; Amity E Green; Christina Avedissian; Sarah K Madsen; Neelroop Parikshak; Arthur W Toga; Clifford R Jack; Norbert Schuff; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2008-11-08       Impact factor: 6.556

8.  Automated 3D mapping of hippocampal atrophy and its clinical correlates in 400 subjects with Alzheimer's disease, mild cognitive impairment, and elderly controls.

Authors:  Jonathan H Morra; Zhuowen Tu; Liana G Apostolova; Amity E Green; Christina Avedissian; Sarah K Madsen; Neelroop Parikshak; Xue Hua; Arthur W Toga; Clifford R Jack; Norbert Schuff; Michael W Weiner; Paul M Thompson
Journal:  Hum Brain Mapp       Date:  2009-09       Impact factor: 5.038

9.  Neurovascular decoupling is associated with severity of cerebral amyloid angiopathy.

Authors:  Stefano Peca; Cheryl R McCreary; Emily Donaldson; Gopukumar Kumarpillai; Nandavar Shobha; Karla Sanchez; Anna Charlton; Craig D Steinback; Andrew E Beaudin; Daniela Flück; Neelan Pillay; Gordon H Fick; Marc J Poulin; Richard Frayne; Bradley G Goodyear; Eric E Smith
Journal:  Neurology       Date:  2013-10-04       Impact factor: 9.910

10.  Myocardial strain in sub-acute peri-infarct myocardium.

Authors:  Balázs Ruzsics; Pál Surányi; Pál Kiss; Brigitta C Brott; Silvio Litovsky; Thomas S Denney; Inmaculada Aban; Steven G Lloyd; Tamas Simor; Gabriel A Elgavish; Himanshu Gupta
Journal:  Int J Cardiovasc Imaging       Date:  2008-10-15       Impact factor: 2.357

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