Literature DB >> 10871412

A novel functional genomics approach identifies mTERT as a suppressor of fibroblast transformation.

Q X Li1, J M Robbins, P J Welch, F Wong-Staal, J R Barber.   

Abstract

As a tool for functional genomics, a hairpin ribozyme gene library with randomized target recognition sequences was constructed in a retroviral vector. This library has the potential to target and cleave any possible RNA substrate. Mouse fibroblasts transduced with this ribozyme gene vector library were selected in a focus formation assay to isolate in vivo functional ribozymes that promote cell transformation in tissue culture. After two successive rounds of selection by focus formation assay, a transforming ribozyme (Rz007) was identified. The sequence of this ribozyme was used to identify the putative target genes responsible for the transformation. A candidate gene target for Rz007 encodes telomerase reverse transcriptase (mTERT). Both mRNA level and enzymatic activity of mTERT were down-regulated in Rz007-transformed cells. Furthermore, newly designed ribozymes, recognizing other potential ribozyme cleavage sites unique to the mTERT mRNA, also cause cell transformation, thus validating the role of mTERT in suppressing the transformation phenotype. These surprising results suggest that the commonly accepted role of telomerase in maintaining cellular immortalization is more complicated than previously thought. These studies also demonstrate the utility of this novel 'reverse' functional genomics approach, enabling the targeted discovery of genes, whether previously known or not, that are involved in any selectable phenotype.

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Year:  2000        PMID: 10871412      PMCID: PMC102704          DOI: 10.1093/nar/28.13.2605

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

1.  Packaging system for rapid production of murine leukemia virus vectors with variable tropism.

Authors:  N R Landau; D R Littman
Journal:  J Virol       Date:  1992-08       Impact factor: 5.103

2.  Transforming viruses directly reduce the cellular growth requirement for a platelet derived growth factor.

Authors:  C D Scher; W J Pledger; P Martin; H Antoniades; C D Stiles
Journal:  J Cell Physiol       Date:  1978-12       Impact factor: 6.384

3.  Inhibition of telomerase limits the growth of human cancer cells.

Authors:  W C Hahn; S A Stewart; M W Brooks; S G York; E Eaton; A Kurachi; R L Beijersbergen; J H Knoll; M Meyerson; R A Weinberg
Journal:  Nat Med       Date:  1999-10       Impact factor: 53.440

4.  Growth factor requirements of oncogene-transformed NIH 3T3 and BALB/c 3T3 cells cultured in defined media.

Authors:  X Zhan; M Goldfarb
Journal:  Mol Cell Biol       Date:  1986-10       Impact factor: 4.272

5.  Peptides on phage: a vast library of peptides for identifying ligands.

Authors:  S E Cwirla; E A Peters; R W Barrett; W J Dower
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

6.  Production of platelet-derived growth factor-like molecules and reduced expression of platelet-derived growth factor receptors accompany transformation by a wide spectrum of agents.

Authors:  D F Bowen-Pope; A Vogel; R Ross
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

7.  Vesicular stomatitis virus G glycoprotein pseudotyped retroviral vectors: concentration to very high titer and efficient gene transfer into mammalian and nonmammalian cells.

Authors:  J C Burns; T Friedmann; W Driever; M Burrascano; J K Yee
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-01       Impact factor: 11.205

8.  Specific association of human telomerase activity with immortal cells and cancer.

Authors:  N W Kim; M A Piatyszek; K R Prowse; C B Harley; M D West; P L Ho; G M Coviello; W E Wright; S L Weinrich; J W Shay
Journal:  Science       Date:  1994-12-23       Impact factor: 47.728

9.  Characterization of ret oncogenic activation in MEN2 inherited cancer syndromes.

Authors:  S Xing; P A Smanik; M J Oglesbee; J E Trosko; E L Mazzaferri; S M Jhiang
Journal:  Endocrinology       Date:  1996-05       Impact factor: 4.736

10.  Telomere elongation in immortal human cells without detectable telomerase activity.

Authors:  T M Bryan; A Englezou; J Gupta; S Bacchetti; R R Reddel
Journal:  EMBO J       Date:  1995-09-01       Impact factor: 11.598

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  11 in total

Review 1.  Natural and pharmacological regulation of telomerase.

Authors:  Jean-Louis Mergny; Jean-François Riou; Patrick Mailliet; Marie-Paule Teulade-Fichou; Eric Gilson
Journal:  Nucleic Acids Res       Date:  2002-02-15       Impact factor: 16.971

2.  C-SPACE (cleavage-specific amplification of cDNA ends): a novel method of ribozyme-mediated gene identification.

Authors:  M Krüger; C Beger; P J Welch; J R Barber; F Wong-Staal
Journal:  Nucleic Acids Res       Date:  2001-10-01       Impact factor: 16.971

3.  Identification of genes by hybrid ribozymes that couple cleavage activity with the unwinding activity of an endogenous RNA helicase.

Authors:  Hiroaki Kawasaki; Kazunari Taira
Journal:  EMBO Rep       Date:  2002-04-18       Impact factor: 8.807

4.  A functional gene discovery in the Fas-mediated pathway to apoptosis by analysis of transiently expressed randomized hybrid-ribozyme libraries.

Authors:  Hiroaki Kawasaki; Kazunari Taira
Journal:  Nucleic Acids Res       Date:  2002-08-15       Impact factor: 16.971

5.  Use of a U16 snoRNA-containing ribozyme library to identify ribozyme targets in HIV-1.

Authors:  Hoshang J Unwalla; Haitang Li; Shi-Yang Li; Danny Abad; John J Rossi
Journal:  Mol Ther       Date:  2008-04-01       Impact factor: 11.454

6.  Involvement of proteasome alpha-subunit PSMA7 in hepatitis C virus internal ribosome entry site-mediated translation.

Authors:  M Krüger; C Beger; P J Welch; J R Barber; M P Manns; F Wong-Staal
Journal:  Mol Cell Biol       Date:  2001-12       Impact factor: 4.272

7.  Complete, gene-specific siRNA libraries: production and expression in mammalian cells.

Authors:  Attila A Seyhan; Alexander V Vlassov; Heini Ilves; Levente Egry; Roger L Kaspar; Sergei A Kazakov; Brian H Johnston
Journal:  RNA       Date:  2005-05       Impact factor: 4.942

8.  FAPP2 gene downregulation increases tumor cell sensitivity to Fas-induced apoptosis.

Authors:  Richard Tritz; Michelle J Hickey; Amy H Lin; Philipp Hadwiger; Dinah W Y Sah; Edward A Neuwelt; Barbara M Mueller; Carol A Kruse
Journal:  Biochem Biophys Res Commun       Date:  2009-03-31       Impact factor: 3.575

9.  Identification of cellular cofactors for human immunodeficiency virus replication via a ribozyme-based genomics approach.

Authors:  Shani Waninger; Kelli Kuhen; Xiuyuan Hu; Jon E Chatterton; Flossie Wong-Staal; Hengli Tang
Journal:  J Virol       Date:  2004-12       Impact factor: 5.103

10.  A structural analysis of in vitro catalytic activities of hammerhead ribozymes.

Authors:  Yu Shao; Susan Wu; Chi Yu Chan; Jessie R Klapper; Erasmus Schneider; Ye Ding
Journal:  BMC Bioinformatics       Date:  2007-11-30       Impact factor: 3.169

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