Literature DB >> 10864511

Correlated motions in native proteins from MS analysis of NH exchange: evidence for a manifold of unfolding reactions in ovomucoid third domain.

C B Arrington1, A D Robertson.   

Abstract

Native-state amide hydrogen exchange monitored by NMR spectroscopy and mass spectrometry (MS) has the potential to provide detailed residue-level information regarding correlated motions occurring on the microseconds to seconds timescale. To expand the applicability of MS to these studies, a new algorithm has been developed to interpret MS data for exchange occurring between the EX2 and EX1 kinetic limits. Re-interpretation of MS data for ovomucoid third domain reveals multiple unfolding or partial unfolding reactions. Copyright 2000 Academic Press.

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Year:  2000        PMID: 10864511     DOI: 10.1006/jmbi.2000.3859

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

1.  Mapping protein energy landscapes with amide hydrogen exchange and mass spectrometry: I. A generalized model for a two-state protein and comparison with experiment.

Authors:  Hui Xiao; Joshua K Hoerner; Stephen J Eyles; Andras Dobo; Edward Voigtman; Andre I Mel'cuk; Igor A Kaltashov
Journal:  Protein Sci       Date:  2005-02       Impact factor: 6.725

2.  Scope and utility of hydrogen exchange as a tool for mapping landscapes.

Authors:  Sheila S Jaswal; Andrew D Miranker
Journal:  Protein Sci       Date:  2007-11       Impact factor: 6.725

3.  Clash between energy landscape theory and foldon-dependent protein folding.

Authors:  Robert L Baldwin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-26       Impact factor: 11.205

Review 4.  How cooperative are protein folding and unfolding transitions?

Authors:  Pooja Malhotra; Jayant B Udgaonkar
Journal:  Protein Sci       Date:  2016-09-13       Impact factor: 6.725

5.  Conformational changes in chemically modified Escherichia coli thioredoxin monitored by H/D exchange and electrospray ionization mass spectrometry.

Authors:  Moo-Young Kim; Claudia S Maier; Donald J Reed; Max L Deinzer
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

6.  Biophysical investigation of GpIbalpha binding to thrombin anion binding exosite II.

Authors:  T Michael Sabo; Muriel C Maurer
Journal:  Biochemistry       Date:  2009-08-04       Impact factor: 3.162

7.  Native state dynamics drive the unfolding of the SH3 domain of PI3 kinase at high denaturant concentration.

Authors:  Ajazul Hamid Wani; Jayant B Udgaonkar
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-17       Impact factor: 11.205

8.  Synthesis of biotin-tagged chemical cross-linkers and their applications for mass spectrometry.

Authors:  Sebyung Kang; Liyuan Mou; Jason Lanman; Sadanandan Velu; Wayne J Brouillette; Peter E Prevelige
Journal:  Rapid Commun Mass Spectrom       Date:  2009-06       Impact factor: 2.419

9.  OneG: a computational tool for predicting cryptic intermediates in the unfolding kinetics of proteins under native conditions.

Authors:  Tambi Richa; Thirunavukkarasu Sivaraman
Journal:  PLoS One       Date:  2012-03-07       Impact factor: 3.240

10.  HDX-MS reveals dysregulated checkpoints that compromise discrimination against self RNA during RIG-I mediated autoimmunity.

Authors:  Jie Zheng; Chen Wang; Mi Ra Chang; Swapnil C Devarkar; Brandon Schweibenz; Gogce C Crynen; Ruben D Garcia-Ordonez; Bruce D Pascal; Scott J Novick; Smita S Patel; Joseph Marcotrigiano; Patrick R Griffin
Journal:  Nat Commun       Date:  2018-12-18       Impact factor: 14.919

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