Literature DB >> 10864192

DNA fingerprinting of a national sample of Mycobacterium tuberculosis isolates, Botswana, 1995-1996.

S Lockman1, J D Sheppard, M Mwasekaga, T A Kenyon, N J Binkin, C R Braden, C L Woodley, D W Rumisha, J W Tappero.   

Abstract

DNA fingerprinting may be useful to elucidate tuberculosis (TB) transmission in community settings, but its utility is limited if only few fingerprint patterns are observed or band numbers are low. We performed DNA fingerprinting on a national, population-based sample of Mycobacterium tuberculosis isolates from Botswana. During 1995-1996, a random sample of 213 isolates, representing 5% of all smear-positive TB cases, underwent DNA fingerprinting using restriction fragment length polymorphism (RFLP) IS6110 analysis. Eighty-two (38%) of the 213 isolates belonged to one of 18 clusters, with 2-9 isolates/cluster. The median number of bands was 10 (range 1-19); 183 (86%) had six or more bands. Sixty-three (49%) of 128 patients tested were infected with the human immunodeficiency virus (HIV). The degree of RFLP pattern heterogeneity and high band number support the feasibility of a prospective DNA fingerprinting study in Botswana.

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Year:  2000        PMID: 10864192

Source DB:  PubMed          Journal:  Int J Tuberc Lung Dis        ISSN: 1027-3719            Impact factor:   2.373


  5 in total

1.  Molecular and conventional epidemiology of Mycobacterium tuberculosis in Botswana: a population-based prospective study of 301 pulmonary tuberculosis patients.

Authors:  S Lockman; J D Sheppard; C R Braden; M J Mwasekaga; C L Woodley; T A Kenyon; N J Binkin; M Steinman; F Montsho; M Kesupile-Reed; C Hirschfeldt; M Notha; T Moeti; J W Tappero
Journal:  J Clin Microbiol       Date:  2001-03       Impact factor: 5.948

2.  Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates from Ethiopian pulmonary tuberculosis patients with and without human immunodeficiency virus infection.

Authors:  Judith Bruchfeld; Getachew Aderaye; Ingela Berggren Palme; Bjarne Bjorvatn; Solomon Ghebremichael; Sven Hoffner; Lars Lindquist
Journal:  J Clin Microbiol       Date:  2002-05       Impact factor: 5.948

3.  Diversity of Mycobacterium tuberculosis genotypes circulating in Ndola, Zambia.

Authors:  Chanda Mulenga; Isdore C Shamputa; David Mwakazanga; Nathan Kapata; Françoise Portaels; Leen Rigouts
Journal:  BMC Infect Dis       Date:  2010-06-17       Impact factor: 3.090

4.  Genetic diversity of Mycobacterium tuberculosis strains circulating in Botswana.

Authors:  Tuelo Mogashoa; Pinkie Melamu; Serej D Ley; Elizabeth M Streicher; Thato Iketleng; Nametso Kelentse; Lucy Mupfumi; Margaret Mokomane; Botshelo Kgwaadira; Vladimir Novitsky; Ishmael Kasvosve; Sikhulile Moyo; Robin M Warren; Simani Gaseitsiwe
Journal:  PLoS One       Date:  2019-05-07       Impact factor: 3.240

5.  Bayesian estimation of mixture models with prespecified elements to compare drug resistance in treatment-naïve and experienced tuberculosis cases.

Authors:  Alane Izu; Ted Cohen; Victor Degruttola
Journal:  PLoS Comput Biol       Date:  2013-03-21       Impact factor: 4.475

  5 in total

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