Literature DB >> 10858659

Adjusting the focus on human variation.

M Przeworski1, R R Hudson, A Di Rienzo.   

Abstract

Studies of nuclear sequence variation are accumulating, such that we can expect a good description of the structure of human variation across populations and genomic regions in the near future. This description will help to elucidate the evolutionary forces that shape patterns of variability. Such an understanding will be of general biological interest, but could also facilitate the design and interpretation of disease-mapping studies. Here, we integrate the results from surveys of nuclear sequence variation. When nuclear sequences are considered together with mtDNA and microsatellites, it becomes clear that neither the standard neutral model, nor a simple long-term exponential growth model, can account for all the available human variation data. A possible explanation is that a subset of loci are not evolving neutrally; even so, more-complex models of effective population size and structure might be necessary to explain the data.

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Year:  2000        PMID: 10858659     DOI: 10.1016/s0168-9525(00)02030-8

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  83 in total

Review 1.  Order emerging from chaos in human evolutionary genetics.

Authors:  A R Rogers
Journal:  Proc Natl Acad Sci U S A       Date:  2001-01-30       Impact factor: 11.205

2.  Gene conversion and different population histories may explain the contrast between polymorphism and linkage disequilibrium levels.

Authors:  L Frisse; R R Hudson; A Bartoszewicz; J D Wall; J Donfack; A Di Rienzo
Journal:  Am J Hum Genet       Date:  2001-08-29       Impact factor: 11.025

3.  Paternal population history of East Asia: sources, patterns, and microevolutionary processes.

Authors:  T Karafet; L Xu; R Du; W Wang; S Feng; R S Wells; A J Redd; S L Zegura; M F Hammer
Journal:  Am J Hum Genet       Date:  2001-07-30       Impact factor: 11.025

4.  Are rare variants responsible for susceptibility to complex diseases?

Authors:  J K Pritchard
Journal:  Am J Hum Genet       Date:  2001-06-12       Impact factor: 11.025

5.  Interrogating a high-density SNP map for signatures of natural selection.

Authors:  Joshua M Akey; Ge Zhang; Kun Zhang; Li Jin; Mark D Shriver
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

6.  The effects of multilocus balancing selection on neutral variability.

Authors:  Arcadio Navarro; Nick H Barton
Journal:  Genetics       Date:  2002-06       Impact factor: 4.562

7.  Sequence variation and haplotype structure at the human HFE locus.

Authors:  Christopher Toomajian; Martin Kreitman
Journal:  Genetics       Date:  2002-08       Impact factor: 4.562

8.  Inferences about human demography based on multilocus analyses of noncoding sequences.

Authors:  Anna Pluzhnikov; Anna Di Rienzo; Richard R Hudson
Journal:  Genetics       Date:  2002-07       Impact factor: 4.562

9.  A neutral explanation for the correlation of diversity with recombination rates in humans.

Authors:  Ines Hellmann; Ingo Ebersberger; Susan E Ptak; Svante Pääbo; Molly Przeworski
Journal:  Am J Hum Genet       Date:  2003-05-08       Impact factor: 11.025

10.  Common 5' beta-globin RFLP haplotypes harbour a surprising level of ancestral sequence mosaicism.

Authors:  Matthew T Webster; John B Clegg; Rosalind M Harding
Journal:  Hum Genet       Date:  2003-05-08       Impact factor: 4.132

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