Literature DB >> 10858292

Specific mutagenesis of the rieske iron-sulfur protein in Rhodobacter sphaeroides shows that both the thermodynamic gradient and the pK of the oxidized form determine the rate of quinol oxidation by the bc(1) complex.

M Guergova-Kuras1, R Kuras, N Ugulava, I Hadad, A R Crofts.   

Abstract

In the Rieske iron-sulfur protein (ISP) of the ubiquinol:cytochrome c(2) oxidoreductase (bc(1) complex) of Rhodobacter sphaeroides, residue Tyr 156 is located close to the iron-sulfur cluster. Previous studies of the equivalent residue in both Saccharomyces cerevisiae [Denke, E., Merbitz-Zahradnik, T., Hatzfeld, O. M., Snyder, C. H., Link, T. A., and Trumpower, B. L. (1998) J. Biol. Chem. 273, 9085-9093] and Paracoccus denitrificans [Schroter, T., Hatzfeld, O. M., Gemeinhardt, S., Korn, M., Friedrich, T., Ludwig, B. , and Link, T. A. (1998) Eur. J. Biochem. 255, 100-106] have indicated that mutations at this site can lead to modifications in the redox potential of the ISP. To study the effect of similar modifications on the thermodynamic behavior and kinetics of partial reactions of the bc(1) complex upon flash activation, we have constructed four mutant strains of Rb. sphaeroides where Tyr 156 was mutated to His, Leu, Phe, or Trp. The bc(1) complex was assembled and able to support photosynthetic growth in all mutants. Three substitutions (Leu, Phe, Trp) led to alteration of the midpoint potential (E(m)) of the ISP and a slowing in rate of quinol oxidation, suggesting that electron transfer from quinol to the oxidized ISP controls the overall rate and that this step includes the high activation barrier. The Trp mutation led to an increase of approximately 1 pH unit in the pK value of the oxidized ISP. The pH dependence of the rate of quinol oxidation in this mutant was also shifted up by approximately 1 pH unit, showing the importance of the protonation state of the ISP for quinol oxidation. This provides support for a model in which the dissociated form of the oxidized ISP is required for formation of the enzyme-substrate complex [Ugulava, N., and Crofts, A. R. (1998) FEBS Lett. 440, 409-413].

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Year:  2000        PMID: 10858292     DOI: 10.1021/bi992491+

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  24 in total

1.  The Cytochrome bc (1) Complex and its Homologue the b (6) f Complex: Similarities and Differences.

Authors:  Elisabeth Darrouzet; Jason W Cooley; Fevzi Daldal
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

2.  Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.

Authors:  Derrick J Kolling; Joseph S Brunzelle; Sangmoon Lhee; Antony R Crofts; Satish K Nair
Journal:  Structure       Date:  2007-01       Impact factor: 5.006

Review 3.  Regulatory interactions in the dimeric cytochrome bc(1) complex: the advantages of being a twin.

Authors:  Raul Covian; Bernard L Trumpower
Journal:  Biochim Biophys Acta       Date:  2008-04-22

4.  Resonance Raman characterization of archaeal and bacterial Rieske protein variants with modified hydrogen bond network around the [2Fe-2S] center.

Authors:  Toshio Iwasaki; Asako Kounosu; Derrick R J Kolling; Sangmoon Lhee; Antony R Crofts; Sergei A Dikanov; Takuro Uchiyama; Takashi Kumasaka; Hiroyuki Ishikawa; Miwa Kono; Takeo Imai; Akio Urushiyama
Journal:  Protein Sci       Date:  2006-08       Impact factor: 6.725

5.  Modifications of protein environment of the [2Fe-2S] cluster of the bc1 complex: effects on the biophysical properties of the rieske iron-sulfur protein and on the kinetics of the complex.

Authors:  Sangmoon Lhee; Derrick R J Kolling; Satish K Nair; Sergei A Dikanov; Antony R Crofts
Journal:  J Biol Chem       Date:  2009-12-20       Impact factor: 5.157

6.  Quinol oxidase encoded by cyoABCD in Rhizobium etli CFN42 is regulated by ActSR and is crucial for growth at low pH or low iron conditions.

Authors:  Zachary R Lunak; K Dale Noel
Journal:  Microbiology       Date:  2015-07-09       Impact factor: 2.777

Review 7.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

8.  Ultrahigh-resolution study on Pyrococcus abyssi rubredoxin: II. Introduction of an O-H...Sgamma-Fe hydrogen bond increased the reduction potential by 65 mV.

Authors:  Heiko Bönisch; Christian L Schmidt; Pierre Bianco; Rudolf Ladenstein
Journal:  J Biol Inorg Chem       Date:  2007-08-22       Impact factor: 3.358

9.  Breaking the Q-cycle: finding new ways to study Qo through thermodynamic manipulations.

Authors:  Sarah E Chobot; Haibo Zhang; Christopher C Moser; P Leslie Dutton
Journal:  J Bioenerg Biomembr       Date:  2008-10-28       Impact factor: 2.945

10.  Redox-dependent structural changes in archaeal and bacterial Rieske-type [2Fe-2S] clusters.

Authors:  Nathaniel J Cosper; D Matthew Eby; Asako Kounosu; Norio Kurosawa; Ellen L Neidle; Donald M Kurtz; Toshio Iwasaki; Robert A Scott
Journal:  Protein Sci       Date:  2002-12       Impact factor: 6.725

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