Literature DB >> 10833228

Enrichment of Geobacter Species in Response to Stimulation of Fe(III) Reduction in Sandy Aquifer Sediments.

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Abstract

Engineered stimulation of Fe(III) has been proposed as a strategy to enhance the immobilization of radioactive and toxic metals in metal-contaminated subsurface environments. Therefore, laboratory and field studies were conducted to determine which microbial populations would respond to stimulation of Fe(III) reduction in the sediments of sandy aquifers. In laboratory studies, the addition of either various organic electron donors or electron shuttle compounds stimulated Fe(III) reduction and resulted in Geobacter sequences becoming important constituents of the Bacterial 16S rDNA sequences that could be detected with PCR amplification and denaturing gradient gel electrophoresis (DGGE). Quantification of Geobacteraceae sequences with a PCR most-probable-number technique indicated that the extent to which numbers of Geobacter increased was related to the degree of stimulation of Fe(III) reduction. Geothrix species were also enriched in some instances, but were orders of magnitude less numerous than Geobacter species. Shewanella species were not detected, even when organic compounds known to be electron donors for Shewanella species were used to stimulate Fe(III) reduction in the sediments. Geobacter species were also enriched in two field experiments in which Fe(III) reduction was stimulated with the addition of benzoate or aromatic hydrocarbons. The apparent growth of Geobacter species concurrent with increased Fe(III) reduction suggests that Geobacter species were responsible for much of the Fe(III) reduction in all of the stimulation approaches evaluated in three geographically distinct aquifers. Therefore, strategies for subsurface remediation that involve enhancing the activity of indigenous Fe(III)-reducing populations in aquifers should consider the physiological properties of Geobacter species in their treatment design.

Entities:  

Year:  2000        PMID: 10833228     DOI: 10.1007/s002480000018

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  66 in total

1.  Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments.

Authors:  Dawn E Holmes; Kevin T Finneran; Regina A O'Neil; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2002-05       Impact factor: 4.792

2.  Relationships between microbial community structure and hydrochemistry in a landfill leachate-polluted aquifer.

Authors:  W F Röling; B M van Breukelen; M Braster; B Lin; H W van Verseveld
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

3.  Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments.

Authors:  J R Stults; O Snoeyenbos-West; B Methe; D R Lovley; D P Chandler
Journal:  Appl Environ Microbiol       Date:  2001-06       Impact factor: 4.792

4.  Microorganisms associated with uranium bioremediation in a high-salinity subsurface sediment.

Authors:  Kelly P Nevin; Kevin T Finneran; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

5.  PROBEmer: A web-based software tool for selecting optimal DNA oligos.

Authors:  Scott J Emrich; Mary Lowe; Arthur L Delcher
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

6.  MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens.

Authors:  Jessica E Butler; Franz Kaufmann; Maddalena V Coppi; Cinthia Núñez; Derek R Lovley
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

7.  Change in bacterial community structure during in situ biostimulation of subsurface sediment cocontaminated with uranium and nitrate.

Authors:  Nadia N North; Sherry L Dollhopf; Lainie Petrie; Jonathan D Istok; David L Balkwill; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

8.  OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens.

Authors:  Ching Leang; M V Coppi; D R Lovley
Journal:  J Bacteriol       Date:  2003-04       Impact factor: 3.490

9.  DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens.

Authors:  Cinthia Núñez; Abraham Esteve-Núñez; Carol Giometti; Sandra Tollaksen; Tripti Khare; Winston Lin; Derek R Lovley; Barbara A Methé
Journal:  J Bacteriol       Date:  2006-04       Impact factor: 3.490

10.  In situ expression of nifD in Geobacteraceae in subsurface sediments.

Authors:  Dawn E Holmes; Kelly P Nevin; Derek R Lovley
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

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