Literature DB >> 10829274

Chemical probing of RNA by nucleotide analog interference mapping.

S P Ryder1, L Ortoleva-Donnelly, A B Kosek, S A Strobel.   

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Year:  2000        PMID： 10829274     DOI： 10.1016/s0076-6879(00)17008-9

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN： 0076-6879            Impact factor:   1.600


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  20 in total

1.  Investigation of adenosine base ionization in the hairpin ribozyme by nucleotide analog interference mapping.

Authors:  S P Ryder; A K Oyelere; J L Padilla; D Klostermeier; D P Millar; S A Strobel
Journal:  RNA       Date:  2001-10       Impact factor: 4.942

2.  A Y639F/H784A T7 RNA polymerase double mutant displays superior properties for synthesizing RNAs with non-canonical NTPs.

Authors:  Robert Padilla; Rui Sousa
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

3.  The non-Watson-Crick base pairs and their associated isostericity matrices.

Authors:  Neocles B Leontis; Jesse Stombaugh; Eric Westhof
Journal:  Nucleic Acids Res       Date:  2002-08-15       Impact factor: 16.971

4.  Molecular basis for RNA kink-turn recognition by the h15.5K small RNP protein.

Authors:  Lara B Weinstein Szewczak; J Scott Gabrielsen; Suzanne J Degregorio; Scott A Strobel; Joan A Steitz
Journal:  RNA       Date:  2005-09       Impact factor: 4.942

5.  Chemical basis of glycine riboswitch cooperativity.

Authors:  Miyun Kwon; Scott A Strobel
Journal:  RNA       Date:  2007-11-27       Impact factor: 4.942

6.  Tertiary interactions determine the accuracy of RNA folding.

Authors:  Seema Chauhan; Sarah A Woodson
Journal:  J Am Chem Soc       Date:  2008-01-08       Impact factor: 15.419

7.  Fluorine substituted adenosines as probes of nucleobase protonation in functional RNAs.

Authors:  Ian T Suydam; Scott A Strobel
Journal:  J Am Chem Soc       Date:  2008-09-20       Impact factor: 15.419

8.  Tertiary architecture of the Oceanobacillus iheyensis group II intron.

Authors:  Navtej Toor; Kevin S Keating; Olga Fedorova; Kanagalaghatta Rajashankar; Jimin Wang; Anna Marie Pyle
Journal:  RNA       Date:  2009-12-01       Impact factor: 4.942

9.  An in vitro evolved glmS ribozyme has the wild-type fold but loses coenzyme dependence.

Authors:  Matthew W L Lau; Adrian R Ferré-D'Amaré
Journal:  Nat Chem Biol       Date:  2013-10-06       Impact factor: 15.040

10.  Dissecting RNA folding by nucleotide analog interference mapping (NAIM).

Authors:  Christina Waldsich
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491
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