Literature DB >> 10819969

The onset of the deuterium isotope effect in cytochrome c oxidase.

M Karpefors1, P Adelroth, P Brzezinski.   

Abstract

We have investigated the dynamics of proton equilibration within the proton-transfer pathway of cytochrome c oxidase from bovine heart that is used for the transfer of both substrate and pumped protons during reaction of the reduced enzyme with oxygen (D-pathway). The kinetics of the slowest phase in the oxidation of the enzyme (the oxo-ferryl --> oxidized transition, F --> O), which is associated with proton uptake, were studied by monitoring absorbance changes at 445 nm. The rate constant of this transition, which is 800 s(-)(1) in H(2)O (at pH approximately 7.5), displayed a kinetic deuterium isotope effect of approximately 4 (i.e., the rate was approximately 200 s(-)(1) in 100% D(2)O). To investigate the kinetics of the onset of the deuterium isotope effect, fully reduced, solubilized CO-bound cytochrome c oxidase in H(2)O was mixed rapidly at a ratio of 1:5 with a D(2)O buffer saturated with oxygen. After a well-defined time period, CO was flashed off using a short laser flash. The time between mixing and flashing off CO was varied within the range 0. 04-10 s. The results show that for the bovine enzyme, the onset of the deuterium isotope effect takes place within two time windows of </=100 ms and approximately 1 s, respectively. The slow onset of the deuterium isotope effect indicates that the rate-limiting step during the F --> O transition is internal proton transfer from a site, proposed to be Glu (I-286) (R. sphaeroides amino acid residue numbering), to the binuclear center. The spontaneous equilibration of protons/deuterons with this site in the interior of the protein is slow (approximately 1 s).

Entities:  

Mesh:

Substances:

Year:  2000        PMID: 10819969     DOI: 10.1021/bi9925221

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Demonstration of proton-coupled electron transfer in the copper-containing nitrite reductases.

Authors:  Sibylle Brenner; Derren J Heyes; Sam Hay; Michael A Hough; Robert R Eady; S Samar Hasnain; Nigel S Scrutton
Journal:  J Biol Chem       Date:  2009-07-07       Impact factor: 5.157

2.  Protons migrate along interfacial water without significant contributions from jumps between ionizable groups on the membrane surface.

Authors:  Andreas Springer; Volker Hagen; Dmitry A Cherepanov; Yuri N Antonenko; Peter Pohl
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-22       Impact factor: 11.205

3.  Mechanistic insights into F420-dependent glucose-6-phosphate dehydrogenase using isotope effects and substrate inhibition studies.

Authors:  Mercy A Oyugi; Ghader Bashiri; Edward N Baker; Kayunta Johnson-Winters
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-08-12       Impact factor: 3.036

4.  Proton-transport mechanisms in cytochrome c oxidase revealed by studies of kinetic isotope effects.

Authors:  Ann-Louise Johansson; Suman Chakrabarty; Catrine L Berthold; Martin Högbom; Arieh Warshel; Peter Brzezinski
Journal:  Biochim Biophys Acta       Date:  2011-04-02

5.  Capturing the energetics of water insertion in biological systems: the water flooding approach.

Authors:  Suman Chakrabarty; Arieh Warshel
Journal:  Proteins       Date:  2012-09-28
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.