Literature DB >> 10818587

An overview on the isolation and analysis of circulating tumor DNA in plasma and serum.

J Jen1, L Wu, D Sidransky.   

Abstract

Molecular biology has brought about a new dimension to our understanding and analysis of human cancer. Diagnosis and prognosis of cancer have increasingly benefited from the use of molecular markers and molecular approaches. Although the description of circulating tumor DNA in the blood has a long history, the clinical implications of its presence require a large body of well-controlled and stringently performed large research and clinical tests. This chapter has provided an overview of the essential elements for the preparation and analysis of circulating DNA in the plasma or serum. We hope that the basic approaches and tips summarized here will serve as a foundation for the rigorous and comprehensive molecular analysis of circulating nucleic acids in the years to come.

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Year:  2000        PMID: 10818587     DOI: 10.1111/j.1749-6632.2000.tb06581.x

Source DB:  PubMed          Journal:  Ann N Y Acad Sci        ISSN: 0077-8923            Impact factor:   5.691


  25 in total

1.  LINE-1 methylation in plasma DNA as a biomarker of activity of DNA methylation inhibitors in patients with solid tumors.

Authors:  Ana Aparicio; Brittany North; Lindsey Barske; Xuemei Wang; Valentina Bollati; Daniel Weisenberger; Christine Yoo; Nizar Tannir; Erin Horne; Susan Groshen; Peter Jones; Allen Yang; Jean-Pierre Issa
Journal:  Epigenetics       Date:  2009-04-06       Impact factor: 4.528

Review 2.  Role of quantitative and qualitative characteristics of free circulating DNA in the management of patients with non-small cell lung cancer.

Authors:  Paola Ulivi; Rosella Silvestrini
Journal:  Cell Oncol (Dordr)       Date:  2013-11-01       Impact factor: 6.730

3.  Dielectrophoretic isolation and detection of cfc-DNA nanoparticulate biomarkers and virus from blood.

Authors:  Avery Sonnenberg; Jennifer Y Marciniak; James McCanna; Rajaram Krishnan; Laura Rassenti; Thomas J Kipps; Michael J Heller
Journal:  Electrophoresis       Date:  2013-04       Impact factor: 3.535

4.  Differentiation of cancer cell type and phenotype using quantum dot-gold nanoparticle sensor arrays.

Authors:  Qian Liu; Yi-Cheun Yeh; Subinoy Rana; Ying Jiang; Lin Guo; Vincent M Rotello
Journal:  Cancer Lett       Date:  2012-09-26       Impact factor: 8.679

5.  Mass spectrometric based analysis, characterization and applications of circulating cell free DNA isolated from human body fluids.

Authors:  Vaneet K Sharma; Paul Vouros; James Glick
Journal:  Int J Mass Spectrom       Date:  2011-07       Impact factor: 1.986

6.  Predictive power of hepatitis B 1762T/1764A mutations in plasma for hepatocellular carcinoma risk in Qidong, China.

Authors:  Alvaro Muñoz; Jian Guo Chen; Patricia A Egner; Melinda L Marshall; Jamie L Johnson; Michael F Schneider; Jian Hua Lu; Yuan Rong Zhu; Jin-Bing Wang; Tao Yang Chen; Thomas W Kensler; John D Groopman
Journal:  Carcinogenesis       Date:  2011-04-07       Impact factor: 4.944

Review 7.  Blood-based analyses of cancer: circulating tumor cells and circulating tumor DNA.

Authors:  Daniel A Haber; Victor E Velculescu
Journal:  Cancer Discov       Date:  2014-05-06       Impact factor: 39.397

8.  Identification of Actionable Genomic Alterations Using Circulating Cell-Free DNA.

Authors:  Nora S Sánchez; Michael P Kahle; Ann Marie Bailey; Chetna Wathoo; Kavitha Balaji; Mehmet Esat Demirhan; Dong Yang; Milind Javle; Ahmed Kaseb; Cathy Eng; Vivek Subbiah; Filip Janku; Victoria M Raymond; Richard B Lanman; Kenna R Mills Shaw; Funda Meric-Bernstam
Journal:  JCO Precis Oncol       Date:  2019-09-24

9.  Detection and differentiation of normal, cancerous, and metastatic cells using nanoparticle-polymer sensor arrays.

Authors:  Avinash Bajaj; Oscar R Miranda; Ik-Bum Kim; Ronnie L Phillips; D Joseph Jerry; Uwe H F Bunz; Vincent M Rotello
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-23       Impact factor: 11.205

10.  Detection of IL28B SNP DNA from buccal epithelial cells, small amounts of serum, and dried blood spots.

Authors:  Philippe Halfon; Denis Ouzan; Hacène Khiri; Guillaume Pénaranda; Paul Castellani; Valerie Oulès; Asma Kahloun; Nolwenn Amrani; Lise Fanteria; Agnès Martineau; Lou Naldi; Marc Bourlière
Journal:  PLoS One       Date:  2012-03-07       Impact factor: 3.240

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